Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6509

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6508: 14876 - KOG2688 Transcription-associated recombination protein - Thp1p, at 948399 to 950118 14876 mRNA_6509: 14877 - K12494 PSD PH and SEC7 domain-containing protein, at 950278 to 955327 14877 mRNA_6510: 14878 - K00818 E2.6.1.11, argD acetylornithine aminotransferase, at 955523 to 957319 14878

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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950,359 - 0.2
950,475 + 0.8
950,498 - 0.9
950,936 - 14877 mRNA_6509 0.13 0.0
950,936 + 14877 mRNA_6509 0.13 0.4
950,940 - 14877 mRNA_6509 0.13 -1.5
951,166 - 14877 mRNA_6509 0.18 -0.1
951,813 + 14877 mRNA_6509 0.30 1.4
951,968 + 14877 mRNA_6509 0.33 0.6
952,241 - 14877 mRNA_6509 0.39 -0.3
953,108 - 14877 mRNA_6509 0.56 1.3
953,551 - 14877 mRNA_6509 0.65 -2.1
953,675 + 14877 mRNA_6509 0.67 2.1
954,170 - 14877 mRNA_6509 0.77 0.3
954,213 + 14877 mRNA_6509 0.78 1.3
954,521 + 14877 mRNA_6509 0.84 0.4
954,607 - 14877 mRNA_6509 0.86 -0.9
954,885 + 0.5
955,203 + 0.8
955,323 - -1.0
955,325 + -0.2
955,358 - 0.4
955,636 - -0.8
955,637 + 0.5
955,680 - 0.2
955,973 + 14878 mRNA_6510 0.25 2.0
955,987 - 14878 mRNA_6510 0.26 -0.7