Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6359

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6359: 14727 - KOG1812 Predicted E3 ubiquitin ligase, at 630775 to 633081 14727 mRNA_6360: 14728 - K17790 TIM22 mitochondrial import inner membrane translocase subunit TIM22, at 633743 to 634504 14728

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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629,794 + 0.3
629,797 + -1.5
629,809 - 0.5
629,812 - 0.3
629,827 - 2.1
629,842 - -0.1
629,850 + -2.2
629,858 - 0.1
629,859 + -1.8
629,864 + -0.4
629,893 - -1.1
629,899 + -0.6
629,902 + 0.4
629,903 - -0.6
629,911 + -0.6
629,917 - -0.5
629,919 - -0.9
629,926 + 0.9
629,956 + -0.1
629,958 + 1.1
629,959 - 0.3
629,976 - 2.4
629,984 + 1.9
629,985 + 0.8
630,000 - 0.8
630,003 + 1.2
630,004 + -0.5
630,008 + 2.4
630,010 + -1.0
630,013 - 2.7
630,024 + -1.6
630,036 - -0.2
630,040 - 0.8
630,041 + 0.2
630,056 - -0.2
630,064 - -0.7
630,159 + 0.7
630,165 - 0.7
630,169 - -1.4
630,183 + 2.5
630,198 - 0.6
630,220 + -0.7
630,234 + 0.7
630,280 + -0.1
630,281 + -2.0
630,285 - -0.3
630,312 - 0.9
630,325 + -0.4
630,343 - 0.1
630,351 + -2.0
630,355 - 0.8
630,355 - 0.6
630,362 - -0.7
630,373 - 1.8
630,375 + 1.0
630,376 - 0.7
630,376 - 0.6
630,379 + -0.3
630,390 + 0.5
630,397 - 1.0
630,446 + 0.6
630,459 - -0.4
630,542 + 1.3
630,588 - 0.9
630,604 - 0.4
630,984 - 0.4
631,191 - 14727 mRNA_6359 0.18 0.8
631,271 - 14727 mRNA_6359 0.21 1.3
631,301 - 14727 mRNA_6359 0.23 0.5
631,310 + 14727 mRNA_6359 0.23 -0.8
631,622 + 14727 mRNA_6359 0.37 -0.4
631,798 - 14727 mRNA_6359 0.44 3.3
632,038 - 14727 mRNA_6359 0.55 0.9
632,184 + 14727 mRNA_6359 0.61 1.8
632,207 + 14727 mRNA_6359 0.62 0.9
632,533 - 14727 mRNA_6359 0.76 0.9
632,673 - 14727 mRNA_6359 0.82 -0.6
632,771 - 14727 mRNA_6359 0.87 1.3
632,903 + -0.0
632,915 - 0.5
632,951 + -0.1
633,227 - 0.1
633,239 + -0.4
633,350 + 1.0
633,352 - -1.3
633,363 - -0.0
633,368 - 0.9
633,377 + -0.5
633,508 + 1.0
633,508 - 1.5
633,682 - -0.7
633,762 - -2.2