Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6231

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6230: 14598 - K10688 UBE2W, UBC16 ubiquitin-conjugating enzyme E2 W, at 306149 to 307289 14598 mRNA_6231: 14599 - KOG2358 NifU-like domain-containing proteins, at 307619 to 308722 14599 mRNA_6232: 14600 - K17450 ACO2 homoaconitase, at 308954 to 311929 14600

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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306,873 - 14598 mRNA_6230 0.63 2.3
306,875 + 14598 mRNA_6230 0.64 -0.6
306,883 + 14598 mRNA_6230 0.64 1.1
306,884 + 14598 mRNA_6230 0.64 -0.1
307,019 - 14598 mRNA_6230 0.76 0.7
307,289 - -0.6
307,427 - 1.9
307,443 - 1.9
307,444 + -0.3
307,454 + -0.6
307,576 - -0.7
307,576 - 0.3
307,589 + -1.7
307,594 - 0.1
307,600 + 0.8
307,605 - -0.7
308,574 + 14599 mRNA_6231 0.87 1.4
308,591 - 14599 mRNA_6231 0.88 -2.5
308,605 + 14599 mRNA_6231 0.89 -0.1
308,732 - 0.4
308,733 + 0.4
308,737 - 1.5
308,825 - 0.3
308,828 - -0.3
308,840 + 2.3
308,860 + -0.4
308,870 + 2.4
308,911 + 1.3
309,032 - -0.3
309,040 + 0.9
309,043 + -0.2
309,046 - 1.0
309,075 + 0.4
309,192 - -1.0
309,201 + 1.2
309,213 + -0.6
309,383 - 14600 mRNA_6232 0.14 2.0
309,511 - 14600 mRNA_6232 0.19 1.1
309,633 + 14600 mRNA_6232 0.23 0.6