Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6180

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6179: 14547 - KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s), at 187281 to 188756 14547 mRNA_6180: 14548 - KOG0218 Mismatch repair MSH3, at 188869 to 192529 14548 mRNA_6181: 14549 - K13126 PABPC polyadenylate-binding protein, at 192986 to 195356 14549

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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188,291 + 14547 mRNA_6179 0.68 1.2
188,455 + 14547 mRNA_6179 0.80 -0.0
189,007 + -0.5
189,126 + 0.2
189,406 - 14548 mRNA_6180 0.15 0.1
189,478 - 14548 mRNA_6180 0.17 0.4
189,585 + 14548 mRNA_6180 0.20 -1.8
190,042 + 14548 mRNA_6180 0.32 0.9
190,631 + 14548 mRNA_6180 0.48 0.7
190,787 + 14548 mRNA_6180 0.52 -0.9
190,798 + 14548 mRNA_6180 0.53 -1.6
190,905 - 14548 mRNA_6180 0.56 0.7
191,116 - 14548 mRNA_6180 0.61 -2.1
191,492 - 14548 mRNA_6180 0.72 -0.5
191,634 - 14548 mRNA_6180 0.76 -0.6
191,676 - 14548 mRNA_6180 0.77 -0.9
191,696 + 14548 mRNA_6180 0.77 -1.7
192,222 + 0.0
192,240 + -1.1
192,371 - 0.5
192,516 - 0.8
192,683 + 0.6
192,705 + 0.8
192,706 - 0.4
192,707 + -0.5
193,068 - -2.1