Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6106

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6106: 14474 - K08332 VAC8 vacuolar protein 8, at 223 to 3658 14474 mRNA_6107: 14475 - K14401 CPSF1, CFT1 cleavage and polyadenylation specificity factor subunit 1, at 3990 to 10005 14475

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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39 + -1.3
39 + 1.9
40 + 0.1
40 + 1.2
40 + -1.1
41 + -0.5
56 + 1.9
56 + 0.2
56 + 0.1
58 + 0.5
59 + -0.1
59 + -3.7
62 - 0.5
65 - -0.2
77 + 0.5
84 + 0.1
102 + -1.5
137 + -0.8
151 + -0.5
200 + 2.3
208 + -0.8
216 + -0.3
229 + -1.3
348 - 1.2
430 + 0.4
498 - -0.5
502 - -0.2
685 + 14474 mRNA_6106 0.13 0.8
747 + 14474 mRNA_6106 0.15 -0.2
755 + 14474 mRNA_6106 0.15 -1.4
946 + 14474 mRNA_6106 0.21 0.5
975 + 14474 mRNA_6106 0.22 0.5
1,245 + 14474 mRNA_6106 0.30 0.2
2,125 + 14474 mRNA_6106 0.55 0.8
2,839 - 14474 mRNA_6106 0.76 0.4
3,125 - 14474 mRNA_6106 0.84 -0.3
3,248 - 14474 mRNA_6106 0.88 -2.2
3,570 + 0.8
3,665 + 0.8
3,692 + 0.9
3,706 + -0.0
3,726 + 0.5
3,820 + -1.2
3,853 + 0.8
3,859 + -0.8
3,909 - 0.0
3,929 - 0.7