Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5975

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5973: 14341 - Hypothetical Protein, at 1359624 to 1360109 14341 mRNA_5974: 14342 - SUPERFAMILY--SSF54909, at 1360106 to 1360539 14342 mRNA_5975: 14343 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1361032 to 1363169 14343 mRNA_5976: 14344 - SUPERFAMILY--SSF52047, at 1363510 to 1364859 14344

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,360,421 - 14342 mRNA_5974 0.73 0.2
1,360,444 - 14342 mRNA_5974 0.78 -1.1
1,360,456 + 14342 mRNA_5974 0.81 0.3
1,360,469 - 14342 mRNA_5974 0.84 0.2
1,360,478 + 14342 mRNA_5974 0.86 1.2
1,360,596 + -0.4
1,360,598 + -0.1
1,360,601 - -1.2
1,360,612 + 0.6
1,360,625 - -0.6
1,360,631 + -0.9
1,360,631 + -0.5
1,360,633 + 0.4
1,360,634 + -0.1
1,360,639 - -1.2
1,360,645 - -1.4
1,360,649 + 0.5
1,360,650 + 1.5
1,360,778 - 0.1
1,360,780 - -1.2
1,360,785 - -1.9
1,360,797 - 0.6
1,360,799 + -1.0
1,360,812 + 1.2
1,360,821 - -1.0
1,360,822 + 1.5
1,360,831 - 1.2
1,360,833 - 0.2
1,360,964 - -0.4
1,361,016 - -2.7
1,361,096 + 0.6
1,361,099 - -0.1
1,361,132 + 1.7
1,361,404 - 14343 mRNA_5975 0.17 0.6
1,361,413 - 14343 mRNA_5975 0.18 0.7
1,361,415 + 14343 mRNA_5975 0.18 0.8
1,361,525 - 14343 mRNA_5975 0.23 1.7
1,362,096 - 14343 mRNA_5975 0.50 2.6
1,362,228 - 14343 mRNA_5975 0.56 0.7
1,362,253 + 14343 mRNA_5975 0.57 1.3
1,362,638 + 14343 mRNA_5975 0.75 0.3
1,362,984 + -1.1
1,363,116 - 0.5
1,363,134 + 0.5
1,363,269 - 1.1
1,363,286 + 0.1
1,363,299 + -0.1
1,363,300 + 1.2
1,363,419 - -0.4
1,363,442 - -0.7
1,363,537 + 0.8
1,363,742 + 14344 mRNA_5976 0.17 -0.0
1,363,979 - 14344 mRNA_5976 0.35 -0.2
1,364,147 - 14344 mRNA_5976 0.47 -0.3