Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5912

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5911: 14279 - ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSitePatterns-EGF-like domain signature 2.-PS01186,ProSiteProfiles-EGF-like domain profile.-PS50026, at 1224353 to 1227750 14279 mRNA_5912: 14280 - K11375 ELP4 elongator complex protein 4, at 1228297 to 1229962 14280 mRNA_5913: 14281 - K14455 GOT2 aspartate aminotransferase, mitochondrial, at 1230072 to 1231795 14281

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,227,650 - -0.6
1,227,831 + -0.7
1,228,417 - -0.1
1,228,665 + 14280 mRNA_5912 0.22 -0.4
1,228,711 - 14280 mRNA_5912 0.25 -1.0
1,229,444 + 14280 mRNA_5912 0.69 -1.2
1,229,900 + 0.3
1,229,904 + 2.6
1,230,360 + 14281 mRNA_5913 0.17 -0.6
1,230,532 + 14281 mRNA_5913 0.27 0.5
1,230,937 - 14281 mRNA_5913 0.50 1.2
1,230,956 + 14281 mRNA_5913 0.51 -0.4
1,230,961 + 14281 mRNA_5913 0.52 -1.0