Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5716

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5715: 14083 - BLAST Elongator complex protein 4 [Ceraceosorus bombacis], at 757827 to 758501 14083 mRNA_5716: 14084 - Hypothetical Protein, at 759003 to 760646 14084 mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760959 to 763265 14085

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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758,059 + 14083 mRNA_5715 0.34 1.6
758,080 + 14083 mRNA_5715 0.37 -0.6
758,094 - 14083 mRNA_5715 0.40 0.3
758,187 + 14083 mRNA_5715 0.53 1.0
758,370 - 14083 mRNA_5715 0.80 0.4
758,383 - 14083 mRNA_5715 0.82 1.1
758,500 + -1.4
758,509 + -0.8
758,819 - 0.1
758,823 + -0.2
758,834 - 2.8
758,845 - -1.8
758,884 - -0.3
758,885 - 0.6
758,891 - -0.1
758,894 + 1.3
758,895 + -1.1
758,901 + 0.1
758,902 - 1.1
758,904 - -0.6
758,916 - 0.2
758,926 - -1.0
758,933 + -0.6
758,936 - 0.0
758,937 - -0.4
758,944 + 1.7
758,957 + 1.7
758,963 + -0.4
758,976 - 0.0
759,091 - 1.7
759,112 + 0.4
759,135 + 0.2
759,227 - 14084 mRNA_5716 0.14 0.4
759,245 - 14084 mRNA_5716 0.15 0.8
759,246 + 14084 mRNA_5716 0.15 2.5
759,277 - 14084 mRNA_5716 0.17 -0.5
759,295 + 14084 mRNA_5716 0.18 -1.9
759,300 - 14084 mRNA_5716 0.18 -0.8
759,392 - 14084 mRNA_5716 0.24 1.5
759,400 + 14084 mRNA_5716 0.24 1.9
759,556 + 14084 mRNA_5716 0.34 0.1
759,569 - 14084 mRNA_5716 0.34 -0.7
759,853 + 14084 mRNA_5716 0.52 -1.7
760,159 + 14084 mRNA_5716 0.70 0.1
760,299 + 14084 mRNA_5716 0.79 1.3
760,455 + 14084 mRNA_5716 0.88 0.7
760,559 - -0.7
760,871 - 1.7
760,872 - -0.3
760,878 + 0.7
760,880 - 1.5
760,882 - -3.0
760,886 + 0.4
760,899 + 1.4
760,899 + 0.4
760,901 + 0.5
761,037 + 1.0
761,041 + -1.3
761,064 - 0.0
761,208 + 14085 mRNA_5717 0.11 -0.2
761,322 - 14085 mRNA_5717 0.16 0.1
761,325 + 14085 mRNA_5717 0.16 -0.0
761,327 - 14085 mRNA_5717 0.16 -1.1
761,613 - 14085 mRNA_5717 0.28 -0.8