Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5632

Experiments: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5631: 13999 - KOG4197 FOG PPR repeat, at 552322 to 556680 13999 mRNA_5632: 14000 - Hypothetical Protein, at 557069 to 557641 14000 mRNA_5633: 14001 - K01679 E4.2.1.2B, fumC fumarate hydratase, class II, at 558284 to 560290 14001

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
556,438 - -0.7
556,528 - 0.1
556,568 + 0.7
556,658 - -0.2
556,685 + 2.0
556,831 - 0.2
556,949 + -0.1
557,273 - 14000 mRNA_5632 0.36 0.1
557,280 - 14000 mRNA_5632 0.37 0.0
557,288 + 14000 mRNA_5632 0.38 -1.6
557,293 + 14000 mRNA_5632 0.39 0.5
557,293 + 14000 mRNA_5632 0.39 0.1
557,300 + 14000 mRNA_5632 0.40 0.3
557,419 + 14000 mRNA_5632 0.61 0.5
557,437 + 14000 mRNA_5632 0.64 -0.2
557,446 + 14000 mRNA_5632 0.66 0.2
557,704 + 0.3
557,739 - 2.0
557,742 + 0.1
557,870 - -0.3
557,882 - 1.8
557,886 - 0.6
557,892 - 0.9
558,052 - 0.9
558,073 - -0.5
558,076 - 1.0
558,180 - -0.4
558,195 - 0.7
558,195 - 0.4
558,199 + 0.8
558,200 - -1.5