Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5573

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5572: 13940 - K18730 GIGYF PERQ amino acid-rich with GYF domain-containing protein, at 405680 to 409565 13940 mRNA_5573: 13941 - BLAST Protein priA [Hypsizygus marmoreus], at 409933 to 411114 13941

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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409,527 + -0.9
409,575 - -0.7
409,590 + 1.6
409,598 - 0.6
409,614 + 1.0
409,614 + -1.1
409,617 - -0.6
409,624 + 0.0
409,670 - -0.1
409,696 - 0.2
409,717 - 0.2
409,730 + -0.2
409,755 - 2.3
409,834 - 0.4
409,863 - 2.1
409,939 + 0.8
410,023 + 0.9
410,040 + 0.7
410,115 + 13941 mRNA_5573 0.15 0.1
410,306 + 13941 mRNA_5573 0.32 1.6
410,323 + 13941 mRNA_5573 0.33 -1.5
410,562 + 13941 mRNA_5573 0.53 0.0
410,580 + 13941 mRNA_5573 0.55 0.3
410,769 + 13941 mRNA_5573 0.71 -0.6
410,799 + 13941 mRNA_5573 0.73 -0.0
410,808 + 13941 mRNA_5573 0.74 1.5
410,828 - 13941 mRNA_5573 0.76 -0.0
410,852 - 13941 mRNA_5573 0.78 0.5
410,865 + 13941 mRNA_5573 0.79 0.6
410,988 + 13941 mRNA_5573 0.89 0.0
411,001 - -0.5
411,007 + -1.2
411,010 + 0.6
411,036 + 0.7
411,059 - 0.5
411,130 - 0.2
411,136 + 1.3
411,149 - 3.1
411,173 - -0.6
411,180 + -0.0
411,185 + 0.8
411,198 + -0.5
411,198 + -0.3
411,220 - -1.2
411,264 - 2.6
411,269 + -0.3
411,271 + 0.2
411,282 + 0.9
411,288 - -1.6
411,293 + -0.6
411,296 - -0.2
411,307 + 0.2
411,310 - 0.7
411,311 - -1.0
411,312 + -0.7
411,315 + -1.3
411,316 - 0.2
411,317 + -0.4
411,317 + 0.0
411,318 + -0.2
411,319 - -0.8
411,319 + 1.0
411,322 - 0.0
411,328 - 0.0
411,337 - -1.3
411,337 + -0.2
411,338 + 0.5
411,345 - -0.9
411,364 - -0.4
411,368 - 0.7
411,374 - 0.4
411,383 - -2.4
411,388 - 0.8
411,395 + -0.3
411,412 + -0.9
411,416 + -1.4
411,424 - 2.5
411,427 - 0.2
411,433 + 0.7
411,438 - -0.3
411,449 - -1.3
411,453 + -0.1
411,455 - -0.4
411,458 - 0.3
411,465 - 1.3
411,466 - 0.9
411,475 + 0.4
411,482 + 0.6
411,489 - -1.0
411,496 - 0.3
411,503 + -0.6
411,504 - 0.5
411,524 - -3.1
411,531 + 1.7
411,541 - 0.9
411,555 - 0.3
411,569 + -0.5
411,570 - -0.3
411,588 - 1.8
411,600 - 1.5
411,619 + 2.7
411,621 - -0.9
411,646 - -0.3
411,651 - 1.2
411,652 - -0.0
411,652 - 1.4
411,657 + -0.2
411,659 + -1.5
411,659 - -1.2
411,661 - 2.0
411,662 - 1.9
411,663 - 0.3
411,663 - 0.6
411,663 + 0.4
411,666 + -0.0
411,672 + 0.2
411,679 + 0.1
411,683 - 0.8
411,684 + 2.7
411,685 + 0.9
411,685 + -0.1
411,685 - 0.5
411,687 - -1.2
411,690 + 0.3
411,692 + -0.4
411,693 + 0.5
411,697 - 1.2
411,702 + 0.0
411,702 - 1.3
411,703 + 0.0
411,707 + 0.8
411,707 + 1.2
411,711 + 0.3
411,715 + 3.1
411,716 + -1.0
411,723 + 0.2
411,727 - -0.4
411,727 + -0.5
411,729 - -0.3
411,742 - -0.1
411,746 - -0.1
411,751 - -2.0
411,754 - -1.5
411,755 + -0.7
411,756 + -1.1
411,761 + -0.3
411,765 - 0.6
411,773 - 0.2
411,774 + 0.9
411,774 + 0.4
411,775 + 0.7
411,775 + -1.8
411,776 + 0.1
411,776 - 0.2
411,781 - -0.0
411,784 + -3.1
411,785 - 0.0
411,788 - 0.7
411,789 - 1.3
411,795 + -0.6
411,795 - 0.6
411,799 + 0.4
411,799 + -1.9
411,801 - 0.0
411,802 - 0.0
411,802 - -1.0
411,815 - 0.8
411,822 - -0.3
411,826 + 0.3
411,831 + 0.9
411,876 + -1.0
411,932 - 1.6
411,948 - 1.0
411,955 + 2.1
411,959 - 0.6
411,959 + 0.1
411,979 + 0.4
411,980 + -0.3
411,985 - 0.0
411,987 + 0.7
411,989 + 0.1
412,064 + 1.7
412,097 + -0.7
412,097 - -1.1