Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5539

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5538: 13906 - Hypothetical Protein, at 327452 to 328556 13906 mRNA_5539: 13907 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 328856 to 330220 13907 mRNA_5540: 13908 - Interpro GDP-fucose protein O-fucosyltransferase, at 330944 to 333027 13908

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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327,904 - 13906 mRNA_5538 0.41 1.5
327,938 - 13906 mRNA_5538 0.44 0.7
327,961 + 13906 mRNA_5538 0.46 1.2
327,963 - 13906 mRNA_5538 0.46 -0.6
328,079 - 13906 mRNA_5538 0.57 1.3
328,079 - 13906 mRNA_5538 0.57 0.6
328,138 - 13906 mRNA_5538 0.62 1.1
328,245 + 13906 mRNA_5538 0.72 1.7
328,251 + 13906 mRNA_5538 0.72 -1.3
328,270 - 13906 mRNA_5538 0.74 0.6
328,524 - 1.1
328,535 + -0.2
328,537 + 0.6
328,540 - 0.5
328,546 - 0.4
328,690 + -2.6
329,242 + 13907 mRNA_5539 0.28 0.8
329,267 - 13907 mRNA_5539 0.30 -0.6
329,597 - 13907 mRNA_5539 0.54 0.8
329,604 - 13907 mRNA_5539 0.55 0.4
329,708 - 13907 mRNA_5539 0.62 0.4
329,859 + 13907 mRNA_5539 0.73 2.7
329,996 + 13907 mRNA_5539 0.84 -1.6
330,435 + 0.3
330,445 - 1.5
330,574 - -0.6
330,579 - 0.2
330,580 + 0.1
330,589 - 0.8
330,728 + 0.7
330,737 - 0.4
330,753 + 1.2
330,753 + 3.0
330,761 + 1.2
330,861 - 1.8
330,870 - 2.6
330,897 - 1.5
331,024 - 1.2