Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5444

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5443: 13811 - KOG3085 Predicted hydrolase (HAD superfamily), at 107127 to 108436 13811 mRNA_5444: 13812 - HMMPfam-Eukaryotic cytochrome b561-PF03188,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 108625 to 109612 13812

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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107,699 - 13811 mRNA_5443 0.44 1.5
107,721 - 13811 mRNA_5443 0.45 -0.5
107,936 - 13811 mRNA_5443 0.62 0.3
107,953 - 13811 mRNA_5443 0.63 -2.8
107,970 - 13811 mRNA_5443 0.64 0.2
108,105 - 13811 mRNA_5443 0.75 0.4
108,215 - 13811 mRNA_5443 0.83 -1.3
108,232 + 13811 mRNA_5443 0.84 -1.0
108,260 - 13811 mRNA_5443 0.86 0.4
108,554 - -0.3
108,572 + 1.3
108,572 - 0.2
108,573 - 0.1
108,709 + 1.8
108,819 - 13812 mRNA_5444 0.20 0.7
108,860 - 13812 mRNA_5444 0.24 -0.0
109,261 + 13812 mRNA_5444 0.64 0.4
109,294 - 13812 mRNA_5444 0.68 -0.8
109,463 - 13812 mRNA_5444 0.85 -1.3
109,466 + 13812 mRNA_5444 0.85 0.4
109,598 - 0.1
109,604 + -0.0
109,730 + 0.1
109,756 + -0.5
109,767 + 0.6
109,771 + 1.0
110,048 - -0.6
110,208 + -0.1
110,213 + 0.2
110,385 - -0.4
110,478 - 0.0
110,492 + -0.3
110,527 - 0.4
110,543 + -1.8
110,545 + 0.6
110,561 + 0.5
110,564 + 1.3
110,593 - -0.1
110,598 - -0.1
110,598 - 1.1
110,602 - -0.1