Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5394

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5394: 13762 - SUPERFAMILY--SSF54897, at 121 to 1074 13762 mRNA_5395: 13763 - KOG4551 GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis, at 1148 to 1997 13763

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1 + -0.0
1 + 0.5
1 + 2.3
1 + -0.3
23 + -1.4
29 + 0.5
29 + 1.7
34 + -2.3
39 + 0.9
39 + -0.7
47 + -0.1
50 + 0.3
50 + -2.9
50 + -1.6
50 + 1.8
50 - 0.7
51 + 2.0
61 + 2.2
62 + -0.3
96 + 2.5
116 + -0.3
158 - 0.4
159 - -0.5
160 - 0.3
169 - 0.5
180 - -0.0
189 + -1.5
198 + -2.3
201 - -0.7
208 - -0.5
210 + 0.7
225 + 13762 mRNA_5394 0.11 -1.7
225 + 13762 mRNA_5394 0.11 0.4
244 + 13762 mRNA_5394 0.13 -2.4
245 - 13762 mRNA_5394 0.13 0.4
271 - 13762 mRNA_5394 0.16 -0.4
276 - 13762 mRNA_5394 0.16 -0.6
277 + 13762 mRNA_5394 0.16 -0.0
280 - 13762 mRNA_5394 0.17 -0.1
306 + 13762 mRNA_5394 0.19 -0.5
317 - 13762 mRNA_5394 0.21 1.0
345 + 13762 mRNA_5394 0.23 -0.6
345 - 13762 mRNA_5394 0.23 -4.0
347 + 13762 mRNA_5394 0.24 -0.4
359 - 13762 mRNA_5394 0.25 -0.6
387 - 13762 mRNA_5394 0.28 -1.9
399 + 13762 mRNA_5394 0.29 1.3
434 + 13762 mRNA_5394 0.33 1.7
447 - 13762 mRNA_5394 0.34 1.5
485 - 13762 mRNA_5394 0.38 0.1
543 + 13762 mRNA_5394 0.44 0.0
649 + 13762 mRNA_5394 0.55 1.5
667 + 13762 mRNA_5394 0.57 -0.2
667 - 13762 mRNA_5394 0.57 0.6
678 - 13762 mRNA_5394 0.58 -0.2
718 + 13762 mRNA_5394 0.63 1.1
723 + 13762 mRNA_5394 0.63 1.5
802 + 13762 mRNA_5394 0.71 0.5
806 + 13762 mRNA_5394 0.72 -0.4
905 - 13762 mRNA_5394 0.82 0.2
911 + 13762 mRNA_5394 0.83 0.9
965 + 13762 mRNA_5394 0.88 0.2
966 + 13762 mRNA_5394 0.89 0.6
968 + 13762 mRNA_5394 0.89 -0.4
1,014 - 0.7
1,084 - -1.4
1,103 - 0.6
1,110 + 0.1
1,245 - 13763 mRNA_5395 0.11 -0.9
1,260 - 13763 mRNA_5395 0.13 -0.2
1,376 - 13763 mRNA_5395 0.27 -0.2
1,438 + 13763 mRNA_5395 0.34 -0.3
1,438 + 13763 mRNA_5395 0.34 -0.1
1,438 + 13763 mRNA_5395 0.34 -0.0
1,523 + 13763 mRNA_5395 0.44 0.9
1,528 - 13763 mRNA_5395 0.45 0.6
1,533 + 13763 mRNA_5395 0.45 0.9
1,538 + 13763 mRNA_5395 0.46 -2.2
1,538 - 13763 mRNA_5395 0.46 -0.8
1,556 + 13763 mRNA_5395 0.48 0.7
1,639 + 13763 mRNA_5395 0.58 0.7
1,854 - 13763 mRNA_5395 0.83 1.2
1,855 - 13763 mRNA_5395 0.83 -0.0
1,887 - 13763 mRNA_5395 0.87 -1.1
1,908 - 13763 mRNA_5395 0.89 -0.9
2,000 - -1.7
2,009 + -0.5