Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5342

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5341: 13709 - KOG0692 Pentafunctional AROM protein, at 495239 to 496655 13709 mRNA_5342: 13710 - KOG0692 Pentafunctional AROM protein, at 496893 to 498783 13710 mRNA_5343: 13711 - K01835 pgm phosphoglucomutase, at 499617 to 502031 13711

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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495,997 + 13709 mRNA_5341 0.53 1.2
496,005 - 13709 mRNA_5341 0.54 -1.9
496,275 - 13709 mRNA_5341 0.73 0.9
496,391 + 13709 mRNA_5341 0.81 1.3
496,427 - 13709 mRNA_5341 0.84 0.1
496,564 + -1.3
496,567 - -0.9
496,572 - 1.2
496,584 + 3.5
496,853 - 0.8
496,874 - 0.1
496,875 - 1.7
496,877 + 1.5
496,884 - 1.0
496,895 + -0.3
496,990 - -0.6
497,019 + 0.2
497,038 + 0.2
497,160 + 13710 mRNA_5342 0.14 1.8
497,195 - 13710 mRNA_5342 0.16 0.6
497,309 - 13710 mRNA_5342 0.22 1.8
497,456 - 13710 mRNA_5342 0.30 -0.3
497,601 - 13710 mRNA_5342 0.37 0.6
497,635 - 13710 mRNA_5342 0.39 0.7
497,646 - 13710 mRNA_5342 0.40 -0.2
497,789 + 13710 mRNA_5342 0.47 -0.2
497,808 - 13710 mRNA_5342 0.48 -1.1
497,912 + 13710 mRNA_5342 0.54 -2.2
498,264 - 13710 mRNA_5342 0.73 0.4
498,333 - 13710 mRNA_5342 0.76 -1.3
498,349 + 13710 mRNA_5342 0.77 -1.7
498,354 + 13710 mRNA_5342 0.77 -0.3
498,683 + -1.4
498,700 - 0.8
498,926 + 1.3
498,935 - 0.5
498,953 - 0.7
498,980 + 1.5
499,540 + 0.6
499,548 - -0.1
499,556 - 0.3
499,575 - 0.4
499,710 + -1.2
499,721 + 1.3
499,723 + -0.4