Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5166

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5165: 13533 - Hypothetical Protein, at 52326 to 52658 13533 mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53307 to 58220 13534 mRNA_5167: 13535 - Hypothetical Protein, at 58782 to 59470 13535

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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52,359 + -0.4
52,371 - 13533 mRNA_5165 0.14 1.5
52,372 + 13533 mRNA_5165 0.14 -1.4
52,438 + 13533 mRNA_5165 0.34 1.3
52,453 + 13533 mRNA_5165 0.38 -0.6
52,460 - 13533 mRNA_5165 0.40 0.2
52,486 - 13533 mRNA_5165 0.48 1.4
52,507 - 13533 mRNA_5165 0.54 -0.4
52,510 - 13533 mRNA_5165 0.55 0.5
52,510 - 13533 mRNA_5165 0.55 -1.5
52,517 + 13533 mRNA_5165 0.57 0.5
52,520 + 13533 mRNA_5165 0.58 0.2
52,522 + 13533 mRNA_5165 0.59 0.2
52,523 + 13533 mRNA_5165 0.59 -1.2
52,524 - 13533 mRNA_5165 0.59 -1.5
52,528 + 13533 mRNA_5165 0.61 0.6
52,530 - 13533 mRNA_5165 0.61 0.4
52,536 + 13533 mRNA_5165 0.63 0.4
52,536 - 13533 mRNA_5165 0.63 0.5
52,538 - 13533 mRNA_5165 0.64 -0.4
52,542 + 13533 mRNA_5165 0.65 -1.2
52,543 + 13533 mRNA_5165 0.65 -1.2
52,560 + 13533 mRNA_5165 0.70 2.5
52,560 + 13533 mRNA_5165 0.70 1.7
52,561 + 13533 mRNA_5165 0.71 0.6
52,567 - 13533 mRNA_5165 0.72 0.6
52,574 - 13533 mRNA_5165 0.74 1.2
52,577 + 13533 mRNA_5165 0.75 0.4
52,581 - 13533 mRNA_5165 0.77 0.7
52,582 + 13533 mRNA_5165 0.77 0.2
52,583 - 13533 mRNA_5165 0.77 -2.3
52,584 + 13533 mRNA_5165 0.77 0.7
52,586 + 13533 mRNA_5165 0.78 0.8
52,596 - 13533 mRNA_5165 0.81 1.9
52,603 - 13533 mRNA_5165 0.83 -1.3
52,648 - 0.3
52,814 + -0.9
52,957 - 0.6
53,154 + 0.1
53,936 + 13534 mRNA_5166 0.13 1.1
54,087 + 13534 mRNA_5166 0.16 2.2
54,171 + 13534 mRNA_5166 0.18 0.4
54,289 - 13534 mRNA_5166 0.20 -1.1
54,615 - 13534 mRNA_5166 0.27 -1.0
54,694 - 13534 mRNA_5166 0.28 -0.0
54,703 + 13534 mRNA_5166 0.28 0.5
55,015 + 13534 mRNA_5166 0.35 0.1
55,358 - 13534 mRNA_5166 0.42 -0.5
55,381 + 13534 mRNA_5166 0.42 0.1
55,454 - 13534 mRNA_5166 0.44 -0.3
55,488 - 13534 mRNA_5166 0.44 1.0
55,551 - 13534 mRNA_5166 0.46 1.1
55,610 - 13534 mRNA_5166 0.47 1.8
55,699 + 13534 mRNA_5166 0.49 -0.1
55,755 - 13534 mRNA_5166 0.50 1.9
55,818 - 13534 mRNA_5166 0.51 1.1
56,002 - 13534 mRNA_5166 0.55 2.0
56,206 + 13534 mRNA_5166 0.59 1.0
56,276 + 13534 mRNA_5166 0.60 0.3
56,329 + 13534 mRNA_5166 0.61 1.0
56,522 + 13534 mRNA_5166 0.65 1.1
56,566 - 13534 mRNA_5166 0.66 1.1
57,009 + 13534 mRNA_5166 0.75 1.6
57,441 - 13534 mRNA_5166 0.84 2.9
57,607 + 13534 mRNA_5166 0.88 0.4
57,706 + 13534 mRNA_5166 0.90 -0.2
57,707 - 13534 mRNA_5166 0.90 1.2
57,858 - -0.9
57,867 + 0.1
57,896 + 0.7
58,295 - 2.1
58,464 + 0.4
58,586 - -0.1
58,589 - 2.1
58,613 - -1.3
58,633 - -0.1
58,734 + -0.7
59,032 - 13535 mRNA_5167 0.36 1.4
59,174 + 13535 mRNA_5167 0.57 2.4
59,187 + 13535 mRNA_5167 0.59 1.0
59,189 + 13535 mRNA_5167 0.59 -0.8