Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5081

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5080: 13448 - K12486 SMAP stromal membrane-associated protein, at 1699891 to 1701497 13448 mRNA_5081: 13449 - K10396 KIF5 kinesin family member 5, at 1701702 to 1705465 13449 mRNA_5082: 13450 - K10696 BRE1 E3 ubiquitin-protein ligase BRE1, at 1706172 to 1709244 13450

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,700,944 - 13448 mRNA_5080 0.66 0.3
1,701,461 - 0.5
1,701,716 - -1.9
1,701,765 - 3.0
1,702,619 + 13449 mRNA_5081 0.24 -2.2
1,703,038 - 13449 mRNA_5081 0.35 0.3
1,703,168 - 13449 mRNA_5081 0.39 -0.1
1,703,345 - 13449 mRNA_5081 0.44 -0.3
1,703,346 - 13449 mRNA_5081 0.44 1.6
1,703,363 + 13449 mRNA_5081 0.44 0.8
1,704,056 + 13449 mRNA_5081 0.63 0.7
1,704,206 + 13449 mRNA_5081 0.67 -0.6
1,705,373 + -0.8
1,705,512 - -0.5
1,705,646 - 1.2
1,705,653 + -1.1
1,705,656 - 0.9
1,705,795 + -1.2
1,705,807 + -0.1
1,705,811 - 0.1
1,705,812 - 0.5
1,706,081 - 1.6
1,706,085 + -1.1
1,706,235 - -0.2
1,706,383 + -0.1