Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4985

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4984: 13352 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784, at 1476412 to 1477119 13352 mRNA_4985: 13353 - BLAST vps9 domain protein [Zymoseptoria brevis], at 1477424 to 1478250 13353 mRNA_4986: 13354 - K17943 PUM pumilio RNA-binding family, at 1478894 to 1482308 13354

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,476,442 + 1.0
1,476,782 + 13352 mRNA_4984 0.52 0.3
1,477,001 + 13352 mRNA_4984 0.83 -2.8
1,477,033 + 13352 mRNA_4984 0.88 -0.5
1,477,123 - -1.5
1,477,134 - 0.2
1,477,135 - 1.2
1,477,135 - -0.9
1,477,143 + 1.4
1,477,143 - 0.0
1,477,167 + 0.5
1,477,167 - -0.9
1,477,177 - 0.9
1,477,196 + 0.8
1,477,255 - 0.7
1,477,337 - 0.8
1,477,351 + 0.4
1,477,356 + 0.8
1,477,471 - 0.5
1,477,494 + 0.1
1,477,625 - 13353 mRNA_4985 0.24 -1.0
1,478,095 - 13353 mRNA_4985 0.81 -1.4
1,478,185 + -0.2
1,478,219 + 0.2
1,478,384 + 0.1
1,478,820 + 0.7
1,479,043 + -0.2
1,479,118 - -0.9