Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4947

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4946: 13314 - KOG0143 Iron/ascorbate family oxidoreductases, at 1378791 to 1380023 13314 mRNA_4947: 13315 - K12584 DCPS, DCS m7GpppX diphosphatase, at 1380148 to 1381498 13315 mRNA_4948: 13316 - Hypothetical Protein, at 1381700 to 1382968 13316

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,379,369 - 13314 mRNA_4946 0.47 0.5
1,379,384 + 13314 mRNA_4946 0.48 0.6
1,379,503 + 13314 mRNA_4946 0.58 -1.3
1,379,832 - 13314 mRNA_4946 0.84 0.0
1,379,929 - 1.3
1,379,950 + 0.4
1,379,959 + 1.2
1,380,114 + -0.8
1,380,250 - -0.2
1,380,264 + 0.3
1,380,270 + -0.3
1,380,394 - 13315 mRNA_4947 0.18 1.0
1,380,412 - 13315 mRNA_4947 0.20 -0.3
1,380,420 - 13315 mRNA_4947 0.20 1.1
1,380,536 - 13315 mRNA_4947 0.29 0.4
1,380,538 + 13315 mRNA_4947 0.29 0.2
1,380,838 - 13315 mRNA_4947 0.51 0.5
1,380,978 + 13315 mRNA_4947 0.61 0.6
1,381,450 - -0.2
1,381,453 + -0.0
1,381,570 - -0.7
1,381,731 - -0.2
1,382,031 + 13316 mRNA_4948 0.26 -0.2
1,382,147 + 13316 mRNA_4948 0.35 -0.1
1,382,180 + 13316 mRNA_4948 0.38 -0.1
1,382,409 - 13316 mRNA_4948 0.56 1.7