Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4557

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4556: 12924 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 455167 to 456572 12924 mRNA_4557: 12925 - KOG3318 Predicted membrane protein, at 456635 to 457680 12925 mRNA_4558: 12926 - K03320 amt, AMT, MEP ammonium transporter, Amt family, at 457914 to 459915 12926

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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455,786 + 12924 mRNA_4556 0.44 0.8
455,964 - 12924 mRNA_4556 0.57 -0.8
456,452 + 3.8
456,748 - 12925 mRNA_4557 0.11 0.4
456,763 + 12925 mRNA_4557 0.12 -0.4
456,799 - 12925 mRNA_4557 0.16 0.3
456,915 + 12925 mRNA_4557 0.27 0.9
456,918 + 12925 mRNA_4557 0.27 -1.3
457,349 + 12925 mRNA_4557 0.68 0.5
457,364 - 12925 mRNA_4557 0.70 1.3
457,931 - 0.5
458,010 + 0.1
458,032 - 0.0
458,043 - 1.2
458,195 - 12926 mRNA_4558 0.14 -1.1
458,337 - 12926 mRNA_4558 0.21 2.6