Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4504

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4503: 12871 - K12397 AP3B AP-3 complex subunit beta, at 335099 to 337846 12871 mRNA_4504: 12872 - Hypothetical Protein, at 338393 to 338917 12872 mRNA_4505: 12873 - K18172 CMC2 COX assembly mitochondrial protein 2, at 338981 to 339395 12873 mRNA_4506: 12874 - KOG4754 Predicted phosphoglycerate mutase, at 339394 to 340797 12874

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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338,090 - 1.7
338,237 - -1.7
338,243 - 0.2
338,248 + -0.7
338,279 + 2.4
338,400 - 0.7
338,402 - -0.1
338,412 + 0.5
338,422 + -0.6
338,682 + 12872 mRNA_4504 0.55 -0.7
338,699 + 12872 mRNA_4504 0.58 -1.2
338,699 + 12872 mRNA_4504 0.58 1.9
339,130 - 12873 mRNA_4505 0.36 1.1
339,137 - 12873 mRNA_4505 0.38 0.6
339,142 + 12873 mRNA_4505 0.39 -0.3
339,154 - 12873 mRNA_4505 0.42 0.5
339,261 - 12873 mRNA_4505 0.67 1.1
339,274 + 12873 mRNA_4505 0.71 0.8
339,279 - 12873 mRNA_4505 0.72 0.3
339,421 + 0.5
339,446 - 0.6
339,465 + 1.2
339,579 - 12874 mRNA_4506 0.13 0.9
339,732 + 12874 mRNA_4506 0.24 0.5
339,887 + 12874 mRNA_4506 0.35 -0.6