Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4494

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4493: 12861 - SUPERFAMILY--SSF52047, at 309576 to 311024 12861 mRNA_4494: 12862 - SUPERFAMILY--SSF52047, at 311321 to 312953 12862 mRNA_4495: 12863 - HMMPfam-TRAPP trafficking subunit Trs65-PF12735, at 313110 to 316762 12863

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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310,345 - 12861 mRNA_4493 0.53 -0.4
310,463 - 12861 mRNA_4493 0.61 1.4
310,789 - 12861 mRNA_4493 0.84 0.2
311,111 - 2.2
311,249 + 1.7
311,565 + 12862 mRNA_4494 0.15 -1.1
311,654 - 12862 mRNA_4494 0.20 -1.2
311,734 - 12862 mRNA_4494 0.25 -2.3
312,243 + 12862 mRNA_4494 0.56 0.5
312,417 + 12862 mRNA_4494 0.67 0.1
312,420 - 12862 mRNA_4494 0.67 0.3
312,444 + 12862 mRNA_4494 0.69 0.4
312,551 + 12862 mRNA_4494 0.75 0.9
312,699 - 12862 mRNA_4494 0.84 -0.5
312,750 + 12862 mRNA_4494 0.88 0.5
312,834 + 0.5
312,888 + 1.3
312,916 + 1.2
313,004 - 1.7
313,042 + 2.7
313,155 - 0.7
313,171 + 1.4
313,190 - -0.3
313,203 + -0.2
313,329 + 0.4
313,332 - -0.1
313,349 + 1.3
313,459 + 1.8
313,624 - 12863 mRNA_4495 0.14 0.4
313,628 + 12863 mRNA_4495 0.14 -0.2
313,639 + 12863 mRNA_4495 0.14 1.9
313,920 - 12863 mRNA_4495 0.22 0.2
313,933 + 12863 mRNA_4495 0.23 0.6