Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4474

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4473: 12841 - K19782 DSS1, MSU1 exoribonuclease II, mitochondrial, at 265412 to 268856 12841 mRNA_4474: 12842 - K01426 E3.5.1.4, amiE amidase, at 268995 to 271231 12842 mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271874 to 274192 12843

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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268,960 - -2.3
269,057 + 0.2
269,062 + 0.2
269,122 + -1.2
269,245 + 12842 mRNA_4474 0.11 1.6
269,318 - 12842 mRNA_4474 0.14 1.3
269,330 - 12842 mRNA_4474 0.15 0.5
269,403 + 12842 mRNA_4474 0.18 -0.6
269,417 + 12842 mRNA_4474 0.19 -0.5
269,420 + 12842 mRNA_4474 0.19 -0.7
269,432 + 12842 mRNA_4474 0.20 1.7
269,554 - 12842 mRNA_4474 0.25 3.0
269,575 - 12842 mRNA_4474 0.26 -0.1
269,612 + 12842 mRNA_4474 0.28 0.6
269,675 + 12842 mRNA_4474 0.30 -2.2
270,207 + 12842 mRNA_4474 0.54 2.1
270,324 - 12842 mRNA_4474 0.59 -3.4
270,454 - 12842 mRNA_4474 0.65 0.8
270,692 - 12842 mRNA_4474 0.76 1.4
270,745 - 12842 mRNA_4474 0.78 0.3
270,863 + 12842 mRNA_4474 0.84 1.7
270,865 + 12842 mRNA_4474 0.84 -2.2
270,873 + 12842 mRNA_4474 0.84 0.2
271,092 - 1.9
271,158 + 1.6
271,192 + -0.9
271,316 - -0.1
271,346 + -0.5
271,349 - 0.3
271,364 - -2.8
271,372 + -0.9
271,382 - 0.6
271,407 - 0.4
271,441 + -3.2
271,457 - 2.9
271,473 - 0.8
271,483 + 0.3
271,493 + 0.4
271,514 + 0.6
271,516 + -0.9
271,564 - -0.9
271,569 - 0.6
271,570 + 0.1
271,592 - -1.1
271,598 - -0.7
271,603 - -0.3
271,604 + 0.7
271,618 - 1.3
271,618 - 2.6
271,618 + 0.0
271,624 + 0.7
271,628 + 0.4
271,639 - 2.3
271,755 - 2.9
271,804 + -0.8