Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4434

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4433: 12801 - Hypothetical Protein, at 173129 to 173293 12801 mRNA_4434: 12802 - Hypothetical Protein, at 173959 to 175087 12802 mRNA_4435: 12803 - KOG0154 RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains, at 175416 to 177921 12803

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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173,001 + 2.5
173,006 - -0.4
173,007 + -0.1
173,044 + -0.6
173,216 - 12801 mRNA_4433 0.53 -3.1
173,483 - 3.0
173,513 - 2.5
173,641 - -0.8
173,749 + 0.8
173,901 - 0.8
173,906 - -0.1
174,054 + 0.1
174,057 + -0.1
174,081 - 12802 mRNA_4434 0.11 -1.8
174,117 + 12802 mRNA_4434 0.14 0.0
174,220 - 12802 mRNA_4434 0.23 0.2
174,228 + 12802 mRNA_4434 0.24 0.1
174,355 - 12802 mRNA_4434 0.35 -0.5
174,362 + 12802 mRNA_4434 0.36 0.8
174,368 + 12802 mRNA_4434 0.36 0.1
174,411 + 12802 mRNA_4434 0.40 -0.1
174,412 + 12802 mRNA_4434 0.40 0.2
174,703 + 12802 mRNA_4434 0.66 0.9
174,773 - 12802 mRNA_4434 0.72 -0.4
174,907 - 12802 mRNA_4434 0.84 -1.2
174,915 + 12802 mRNA_4434 0.85 1.3
174,941 - 12802 mRNA_4434 0.87 -0.2
174,947 + 12802 mRNA_4434 0.88 0.0
175,090 + 0.2
175,090 - -0.2
175,218 + 0.6
175,223 + 1.5
175,390 + -2.1
175,485 + -0.1
175,544 - -0.2
175,554 + 0.9
175,667 - 12803 mRNA_4435 0.10 -0.7
175,815 + 12803 mRNA_4435 0.16 -0.1
175,945 + 12803 mRNA_4435 0.21 -0.8