Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4381

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4380: 12748 - K00550 OPI3 methylene-fatty-acyl-phospholipid synthase, at 58451 to 59547 12748 mRNA_4381: 12749 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 59708 to 61504 12749 mRNA_4382: 12750 - Hypothetical Protein, at 61848 to 63283 12750

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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58,710 - 12748 mRNA_4380 0.24 -1.8
58,716 + 12748 mRNA_4380 0.24 -1.3
58,985 + 12748 mRNA_4380 0.49 -3.6
59,174 + 12748 mRNA_4380 0.66 -1.5
59,174 + 12748 mRNA_4380 0.66 -3.8
59,177 - 12748 mRNA_4380 0.66 -2.7
59,283 - 12748 mRNA_4380 0.76 -1.7
59,431 - 12748 mRNA_4380 0.89 -2.8
59,446 + -0.4
59,723 + 0.2
59,913 + 12749 mRNA_4381 0.11 0.9
60,110 - 12749 mRNA_4381 0.22 1.9
60,328 + 12749 mRNA_4381 0.35 0.2
60,450 - 12749 mRNA_4381 0.41 0.4
60,731 + 12749 mRNA_4381 0.57 2.6
60,758 - 12749 mRNA_4381 0.58 0.1
60,879 + 12749 mRNA_4381 0.65 -1.0
61,044 + 12749 mRNA_4381 0.74 0.9
61,057 - 12749 mRNA_4381 0.75 0.7
61,173 + 12749 mRNA_4381 0.82 1.0
61,200 - 12749 mRNA_4381 0.83 -1.1
61,299 - 12749 mRNA_4381 0.89 1.2
61,304 - 12749 mRNA_4381 0.89 1.2
61,603 + -1.3
61,629 - -0.0
61,633 - 2.4
62,159 - 12750 mRNA_4382 0.22 -0.1