Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4115

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4114: 12482 - HMMPfam-NADH-ubiquinone reductase complex 1 MLRQ subunit-PF06522, at 1382865 to 1383586 12482 mRNA_4115: 12483 - BLAST Nuclear receptor corepressor 2 [Rhizoctonia solani], at 1383880 to 1387227 12483 mRNA_4116: 12484 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1387414 to 1388698 12484

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,382,882 - 1.1
1,382,883 + -0.3
1,382,895 + 0.6
1,383,025 + 12482 mRNA_4114 0.22 3.7
1,383,026 - 12482 mRNA_4114 0.22 -0.1
1,383,030 - 12482 mRNA_4114 0.23 -0.2
1,383,040 + 12482 mRNA_4114 0.24 0.1
1,383,040 - 12482 mRNA_4114 0.24 -0.0
1,383,041 + 12482 mRNA_4114 0.24 -0.8
1,383,043 + 12482 mRNA_4114 0.25 0.1
1,383,048 + 12482 mRNA_4114 0.25 1.3
1,383,058 + 12482 mRNA_4114 0.27 -0.8
1,383,176 + 12482 mRNA_4114 0.43 -0.0
1,383,187 + 12482 mRNA_4114 0.45 -0.8
1,383,305 - 12482 mRNA_4114 0.61 0.7
1,383,332 + 12482 mRNA_4114 0.65 2.4
1,383,342 - 12482 mRNA_4114 0.66 1.0
1,383,381 - 12482 mRNA_4114 0.71 1.5
1,383,457 - 12482 mRNA_4114 0.82 0.5
1,383,460 - 12482 mRNA_4114 0.82 1.2
1,383,461 + 12482 mRNA_4114 0.83 0.4
1,383,508 + 12482 mRNA_4114 0.89 2.9
1,383,598 - -1.5
1,383,599 + -0.7
1,383,606 + 0.1
1,383,615 - -1.6
1,383,668 + -0.9
1,383,756 - 0.4
1,383,761 + 2.8
1,383,770 + 0.1
1,383,796 - 0.3
1,383,863 - 2.1
1,383,924 - 0.5
1,383,926 - 0.4
1,383,928 + 2.3
1,383,930 + -1.0
1,383,936 + 1.2
1,383,940 - 0.6
1,384,044 + -0.1
1,384,092 + 0.7
1,384,092 - 1.0
1,384,106 - -2.2
1,384,107 - -0.3
1,384,120 - 0.3
1,384,375 + 12483 mRNA_4115 0.15 0.7
1,384,546 + 12483 mRNA_4115 0.20 -1.0
1,385,088 - 12483 mRNA_4115 0.36 1.0
1,385,105 - 12483 mRNA_4115 0.37 0.1
1,385,396 + 12483 mRNA_4115 0.45 -0.5
1,385,592 + 12483 mRNA_4115 0.51 1.6
1,385,638 - 12483 mRNA_4115 0.53 1.0
1,385,735 + 12483 mRNA_4115 0.55 -0.5
1,385,898 - 12483 mRNA_4115 0.60 0.7
1,386,192 - 12483 mRNA_4115 0.69 -1.1
1,386,311 - 12483 mRNA_4115 0.73 -0.3
1,386,504 + 12483 mRNA_4115 0.78 -0.0
1,386,585 + 12483 mRNA_4115 0.81 -0.2
1,386,633 - 12483 mRNA_4115 0.82 0.0
1,386,761 - 12483 mRNA_4115 0.86 1.3
1,386,789 + 12483 mRNA_4115 0.87 1.1
1,387,051 - 0.3
1,387,072 + 0.6
1,387,229 + -1.1
1,387,235 - 1.1
1,387,285 - 0.3
1,387,319 - 0.8
1,387,336 - -0.3
1,387,339 + 0.1
1,387,340 + -0.2
1,387,353 + -0.3
1,387,366 - -0.7
1,387,376 + -0.0
1,387,378 - 0.7
1,387,393 - 0.7
1,387,402 + -2.0
1,387,538 + -0.2
1,387,802 + 12484 mRNA_4116 0.30 -1.2
1,387,817 - 12484 mRNA_4116 0.31 0.2
1,387,818 - 12484 mRNA_4116 0.31 2.4
1,387,962 - 12484 mRNA_4116 0.43 -0.8