Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4085

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4084: 12452 - KOG1674 Cyclin, at 1322887 to 1323848 12452 mRNA_4085: 12453 - Hypothetical Protein, at 1324177 to 1324971 12453

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,323,830 - 3.1
1,323,862 - 2.5
1,323,865 - -0.4
1,323,866 + 1.0
1,323,868 - 2.5
1,323,895 - -1.1
1,323,917 + 1.0
1,323,919 + 0.7
1,323,936 + 0.4
1,323,978 - 0.4
1,324,009 + 1.8
1,324,015 + 1.1
1,324,021 - -1.2
1,324,022 - 0.5
1,324,022 - 1.6
1,324,024 + 1.8
1,324,026 + -0.1
1,324,027 - 1.0
1,324,028 + -0.2
1,324,029 - -1.7
1,324,032 - 2.3
1,324,036 - 0.6
1,324,047 + 0.2
1,324,049 - 0.8
1,324,052 + 1.3
1,324,054 + 0.4
1,324,056 + 0.8
1,324,056 + -0.2
1,324,059 + -0.7
1,324,072 + 0.5
1,324,076 + 2.1
1,324,077 + -0.7
1,324,079 + 1.6
1,324,079 + 0.9
1,324,081 + 1.8
1,324,088 + 0.4
1,324,102 - 0.3
1,324,102 + 0.9
1,324,108 - 1.5
1,324,110 + 0.3
1,324,132 + 0.4
1,324,155 + -1.7
1,324,177 + 0.8
1,324,195 - 0.3
1,324,212 - 0.7
1,324,212 - 0.3
1,324,214 - 0.5
1,324,229 + 2.0
1,324,234 + 0.5
1,324,239 - 0.6
1,324,240 - 0.4
1,324,240 - -2.2
1,324,242 + 0.2
1,324,245 + 0.4
1,324,247 - -0.1
1,324,249 + -0.5
1,324,253 - 1.7
1,324,253 + 1.1
1,324,254 - -0.5
1,324,254 + 0.5
1,324,255 + 1.4
1,324,257 - 12453 mRNA_4085 0.10 0.1
1,324,258 + 12453 mRNA_4085 0.10 -0.9
1,324,264 + 12453 mRNA_4085 0.11 2.2
1,324,265 + 12453 mRNA_4085 0.11 -0.3
1,324,267 - 12453 mRNA_4085 0.11 0.5
1,324,268 + 12453 mRNA_4085 0.11 2.1
1,324,268 + 12453 mRNA_4085 0.11 1.0
1,324,268 + 12453 mRNA_4085 0.11 -0.1
1,324,268 + 12453 mRNA_4085 0.11 1.5
1,324,271 + 12453 mRNA_4085 0.12 -0.2
1,324,272 - 12453 mRNA_4085 0.12 0.5
1,324,273 + 12453 mRNA_4085 0.12 0.0
1,324,278 - 12453 mRNA_4085 0.13 0.2
1,324,279 + 12453 mRNA_4085 0.13 -0.7
1,324,279 - 12453 mRNA_4085 0.13 -1.1
1,324,280 + 12453 mRNA_4085 0.13 -0.2
1,324,281 - 12453 mRNA_4085 0.13 -0.1
1,324,285 + 12453 mRNA_4085 0.14 1.1
1,324,286 - 12453 mRNA_4085 0.14 0.8
1,324,286 - 12453 mRNA_4085 0.14 1.1
1,324,287 + 12453 mRNA_4085 0.14 -0.6
1,324,287 + 12453 mRNA_4085 0.14 0.1
1,324,287 + 12453 mRNA_4085 0.14 -0.9
1,324,295 + 12453 mRNA_4085 0.15 0.4
1,324,302 - 12453 mRNA_4085 0.16 0.3
1,324,302 - 12453 mRNA_4085 0.16 0.0
1,324,310 + 12453 mRNA_4085 0.17 -0.6
1,324,315 - 12453 mRNA_4085 0.17 -0.5
1,324,318 - 12453 mRNA_4085 0.18 0.8
1,324,325 - 12453 mRNA_4085 0.19 0.7
1,324,340 - 12453 mRNA_4085 0.21 1.7
1,324,358 - 12453 mRNA_4085 0.23 0.7
1,324,361 + 12453 mRNA_4085 0.23 -2.6
1,324,362 - 12453 mRNA_4085 0.23 2.4
1,324,368 - 12453 mRNA_4085 0.24 0.2
1,324,376 + 12453 mRNA_4085 0.25 1.0
1,324,376 - 12453 mRNA_4085 0.25 -0.4
1,324,380 - 12453 mRNA_4085 0.26 0.9
1,324,381 + 12453 mRNA_4085 0.26 1.0
1,324,387 + 12453 mRNA_4085 0.26 -0.6
1,324,388 - 12453 mRNA_4085 0.27 -1.0
1,324,390 + 12453 mRNA_4085 0.27 -0.2
1,324,391 - 12453 mRNA_4085 0.27 -0.1
1,324,392 + 12453 mRNA_4085 0.27 1.5
1,324,393 + 12453 mRNA_4085 0.27 0.6
1,324,395 - 12453 mRNA_4085 0.27 1.2
1,324,395 + 12453 mRNA_4085 0.27 2.5
1,324,399 - 12453 mRNA_4085 0.28 1.1
1,324,407 + 12453 mRNA_4085 0.29 0.4
1,324,417 + 12453 mRNA_4085 0.30 -0.0
1,324,425 + 12453 mRNA_4085 0.31 0.1
1,324,455 - 12453 mRNA_4085 0.35 0.7
1,324,468 - 12453 mRNA_4085 0.37 -1.5
1,324,496 + 12453 mRNA_4085 0.40 0.7
1,324,506 + 12453 mRNA_4085 0.41 -0.6
1,324,547 - 12453 mRNA_4085 0.47 -0.2
1,324,550 - 12453 mRNA_4085 0.47 1.6
1,324,551 - 12453 mRNA_4085 0.47 -1.5
1,324,551 - 12453 mRNA_4085 0.47 -1.2
1,324,551 - 12453 mRNA_4085 0.47 0.3
1,324,553 + 12453 mRNA_4085 0.47 0.2
1,324,554 + 12453 mRNA_4085 0.47 1.9
1,324,555 - 12453 mRNA_4085 0.48 1.5
1,324,567 + 12453 mRNA_4085 0.49 0.3
1,324,567 - 12453 mRNA_4085 0.49 0.5
1,324,569 + 12453 mRNA_4085 0.49 -0.9
1,324,570 + 12453 mRNA_4085 0.49 0.3
1,324,570 - 12453 mRNA_4085 0.49 2.2
1,324,575 + 12453 mRNA_4085 0.50 -0.2
1,324,576 - 12453 mRNA_4085 0.50 -0.2
1,324,579 + 12453 mRNA_4085 0.51 0.3
1,324,579 - 12453 mRNA_4085 0.51 -0.8
1,324,581 - 12453 mRNA_4085 0.51 0.3
1,324,587 + 12453 mRNA_4085 0.52 0.2
1,324,591 - 12453 mRNA_4085 0.52 2.3
1,324,602 + 12453 mRNA_4085 0.53 -0.6
1,324,610 + 12453 mRNA_4085 0.54 -0.7
1,324,630 - 12453 mRNA_4085 0.57 2.1
1,324,692 - 12453 mRNA_4085 0.65 -0.3
1,324,693 + 12453 mRNA_4085 0.65 0.5
1,324,709 - 12453 mRNA_4085 0.67 -1.3
1,324,714 - 12453 mRNA_4085 0.68 0.3
1,324,724 - 12453 mRNA_4085 0.69 1.7
1,324,730 - 12453 mRNA_4085 0.70 0.4
1,324,733 + 12453 mRNA_4085 0.70 -1.2
1,324,738 + 12453 mRNA_4085 0.71 0.8
1,324,742 - 12453 mRNA_4085 0.71 0.1
1,324,745 + 12453 mRNA_4085 0.71 -0.1
1,324,760 + 12453 mRNA_4085 0.73 -0.8
1,324,767 + 12453 mRNA_4085 0.74 1.5
1,324,809 - 12453 mRNA_4085 0.79 0.4
1,324,840 + 12453 mRNA_4085 0.83 -1.0
1,324,848 + 12453 mRNA_4085 0.84 -0.1
1,324,870 - 12453 mRNA_4085 0.87 0.1
1,324,870 - 12453 mRNA_4085 0.87 1.2
1,324,871 + 12453 mRNA_4085 0.87 0.6
1,324,871 + 12453 mRNA_4085 0.87 2.0
1,324,877 - 12453 mRNA_4085 0.88 -0.6
1,324,890 - 12453 mRNA_4085 0.90 0.3
1,324,898 + 0.2
1,324,898 + 0.4
1,324,914 + 0.5
1,324,915 - 0.5
1,324,916 - 0.4
1,324,919 + 0.5
1,324,924 - 0.0
1,325,000 - -0.2
1,325,016 + 1.9
1,325,016 - -0.3
1,325,032 - 0.8
1,325,032 - -0.5
1,325,039 - 1.4
1,325,043 - 0.4
1,325,047 + -0.6
1,325,050 - 0.4
1,325,050 + 0.9
1,325,055 - 0.9
1,325,057 + 2.4
1,325,066 - 0.6
1,325,069 - 2.4
1,325,079 + 0.4
1,325,086 - 2.4
1,325,097 - 0.0
1,325,097 + 0.1
1,325,102 - -0.2
1,325,114 + 1.5
1,325,116 + 0.5
1,325,121 + -0.5
1,325,146 - 0.4
1,325,148 + 1.1
1,325,177 + 0.4
1,325,179 + -0.2
1,325,201 + 0.1
1,325,203 - -0.7
1,325,205 - 1.2
1,325,205 + 0.6
1,325,222 + 1.0
1,325,228 + 1.7
1,325,231 - -0.4
1,325,243 + 0.8
1,325,246 - -1.1
1,325,247 - -3.8
1,325,250 + 0.3
1,325,251 + 1.1
1,325,253 - 0.5
1,325,258 + -0.0
1,325,260 + 0.6
1,325,263 - 1.9
1,325,264 - -1.9
1,325,264 + 1.7
1,325,283 + 0.7
1,325,289 - -1.2
1,325,291 - -0.7
1,325,293 - 0.5
1,325,294 + -0.5
1,325,341 - 1.6
1,325,350 - -0.9
1,325,359 - -2.3
1,325,368 - -0.2
1,325,374 - -0.2
1,325,379 - 0.9
1,325,380 - 1.9
1,325,385 + 1.0
1,325,390 + -0.3
1,325,395 - -0.9
1,325,409 + -2.3
1,325,414 + -0.6
1,325,416 - -0.8
1,325,417 + -0.3
1,325,427 + 2.1
1,325,430 + 0.5
1,325,434 - 0.0
1,325,458 + -0.3
1,325,482 - 0.7
1,325,575 + 0.4
1,325,575 + 2.5
1,325,587 - -0.1
1,325,588 - 0.4
1,325,593 + 0.4
1,325,596 - 1.9
1,325,602 + 0.1
1,325,617 - -0.7
1,325,624 - -0.5
1,325,665 + -1.3
1,325,730 + 0.7
1,325,733 + 1.2
1,325,753 + 0.2
1,325,756 + 2.7
1,325,770 - -0.5
1,325,815 - -0.9
1,325,818 - 2.1
1,325,871 + 0.5
1,325,885 - 0.2
1,325,886 + -0.0
1,325,887 + 1.0
1,325,891 + -0.3
1,325,899 + 0.8
1,325,901 - 0.8
1,325,919 + 1.0