Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4076

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4075: 12443 - Hypothetical Protein, at 1297147 to 1298186 12443 mRNA_4076: 12444 - K12486 SMAP stromal membrane-associated protein, at 1298752 to 1301700 12444 mRNA_4077: 12445 - K07101 K07101 uncharacterized protein, at 1302423 to 1303629 12445

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,297,937 + 12443 mRNA_4075 0.76 0.1
1,298,068 - 12443 mRNA_4075 0.89 0.3
1,298,210 - 0.3
1,298,242 - 0.5
1,298,263 - -0.0
1,298,792 + 1.1
1,298,816 - -1.1
1,298,843 + 0.1
1,298,996 - 1.8
1,299,073 + 12444 mRNA_4076 0.11 1.3
1,299,086 + 12444 mRNA_4076 0.11 -0.3
1,299,088 - 12444 mRNA_4076 0.11 0.8
1,299,160 + 12444 mRNA_4076 0.14 0.0
1,299,366 + 12444 mRNA_4076 0.21 0.9
1,299,396 + 12444 mRNA_4076 0.22 0.6
1,299,405 - 12444 mRNA_4076 0.22 -0.5
1,299,415 + 12444 mRNA_4076 0.22 -0.0
1,299,461 + 12444 mRNA_4076 0.24 0.1
1,299,673 + 12444 mRNA_4076 0.31 0.9
1,300,106 + 12444 mRNA_4076 0.46 0.8
1,300,294 + 12444 mRNA_4076 0.52 -0.6
1,300,739 + 12444 mRNA_4076 0.67 0.3
1,301,029 + 12444 mRNA_4076 0.77 0.9
1,301,323 - 12444 mRNA_4076 0.87 0.3
1,301,339 - 12444 mRNA_4076 0.88 1.8
1,301,454 - 2.1
1,301,461 + 1.2
1,301,601 - 0.3
1,301,757 - 0.5
1,301,765 + 0.7
1,301,770 - 0.7
1,301,772 - -1.1
1,301,773 + -2.3
1,301,903 + 0.4
1,301,903 + 0.6
1,301,909 + 0.8
1,302,042 + 1.9
1,302,209 - -0.1
1,302,614 - 12445 mRNA_4077 0.16 1.2
1,302,620 - 12445 mRNA_4077 0.16 1.3
1,302,621 - 12445 mRNA_4077 0.16 1.3
1,302,633 + 12445 mRNA_4077 0.17 -1.4