Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4054

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4053: 12421 - K00602 purH phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase, at 1245651 to 1248069 12421 mRNA_4054: 12422 - KOG2973 Uncharacterized conserved protein, at 1248233 to 1250054 12422 mRNA_4055: 12423 - HMMPfam-Glyoxalase-like domain-PF12681,SUPERFAMILY--SSF54593, at 1250163 to 1250733 12423 mRNA_4056: 12424 - BLAST tRNA(His) guanylyltransferase [Kwoniella heveanensis ..., at 1250945 to 1252332 12424

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,248,143 - -0.6
1,248,152 + 1.0
1,248,152 + 0.9
1,248,153 - -0.4
1,248,157 - 1.0
1,248,164 + 1.4
1,248,171 - -0.2
1,248,171 + 1.8
1,248,190 + -0.7
1,248,279 - -1.6
1,248,342 + -1.0
1,248,445 + 12422 mRNA_4054 0.12 -0.2
1,248,631 + 12422 mRNA_4054 0.22 0.1
1,250,276 + 12423 mRNA_4055 0.20 1.1
1,250,320 - 12423 mRNA_4055 0.27 -0.0
1,250,594 - 12423 mRNA_4055 0.75 -0.6
1,250,622 + 12423 mRNA_4055 0.80 0.3
1,250,623 - 12423 mRNA_4055 0.81 0.2
1,250,623 - 12423 mRNA_4055 0.81 0.9
1,250,895 - 0.2
1,250,898 - 0.3
1,250,898 + -0.4
1,251,039 - 0.8
1,251,047 - 1.4
1,251,054 + 0.2