Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3883

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3882: 12250 - Hypothetical Protein, at 815200 to 816864 12250 mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817567 to 820111 12251 mRNA_3884: 12252 - Hypothetical Protein, at 820246 to 821511 12252

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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816,591 - 12250 mRNA_3882 0.84 0.1
816,601 + 12250 mRNA_3882 0.84 0.6
816,851 + 0.6
816,857 + -1.3
816,865 + -0.9
816,904 - 0.5
816,915 - 1.0
817,016 + 0.7
817,037 - -0.4
817,040 + -0.8
817,041 - -0.2
817,054 - 1.3
817,060 - -0.8
817,063 + -1.3
817,068 + -1.5
817,068 + -0.1
817,104 + -1.1
817,111 + 0.8
817,112 - 0.6
817,115 + 0.5
817,133 + 0.2
817,141 + 1.1
817,161 - -0.1
817,168 + 0.8
817,169 - -1.0
817,179 + 1.1
817,183 - 0.4
817,195 - -1.0
817,196 + 0.9
817,201 + -1.5
817,274 - -0.1
817,344 + -0.6
817,351 + 0.5
817,372 + -0.1
817,383 + -0.1
817,489 - -0.6
817,501 - 0.4
817,503 + 0.2
817,512 + 0.7
817,518 - 0.1
817,623 - 1.2
817,646 + -0.1
817,651 + -1.0
817,660 + 0.4
817,694 + 0.4
817,831 - 12251 mRNA_3883 0.10 0.2
817,909 - 12251 mRNA_3883 0.13 0.1
817,968 + 12251 mRNA_3883 0.16 1.0
817,975 + 12251 mRNA_3883 0.16 0.8
818,098 - 12251 mRNA_3883 0.21 0.7
818,266 + 12251 mRNA_3883 0.27 -0.6
818,463 - 12251 mRNA_3883 0.35 0.7
818,676 - 12251 mRNA_3883 0.44 1.1
818,697 - 12251 mRNA_3883 0.44 2.3
818,829 + 12251 mRNA_3883 0.50 -0.0
818,832 - 12251 mRNA_3883 0.50 -1.1
818,875 + 12251 mRNA_3883 0.51 0.5
819,026 + 12251 mRNA_3883 0.57 -1.2
819,307 + 12251 mRNA_3883 0.68 -1.3
819,623 - 12251 mRNA_3883 0.81 -0.3
820,020 + 2.4
820,055 - 0.2
820,162 + -0.4
820,203 + 0.1
820,328 - 1.5
820,351 + 0.6
820,560 + 12252 mRNA_3884 0.25 -1.4
820,587 - 12252 mRNA_3884 0.27 0.4
820,658 - 12252 mRNA_3884 0.33 0.1
820,914 + 12252 mRNA_3884 0.53 0.9
820,927 - 12252 mRNA_3884 0.54 0.9
821,072 + 12252 mRNA_3884 0.65 -0.3