Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3874

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800106 to 800939 12241 mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801011 to 802122 12242 mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802441 to 804314 12243

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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800,119 + -0.0
800,362 - 12241 mRNA_3873 0.31 -1.4
800,372 + 12241 mRNA_3873 0.32 -2.1
800,537 - 12241 mRNA_3873 0.52 1.0
800,689 - 12241 mRNA_3873 0.70 0.8
800,696 + 12241 mRNA_3873 0.71 2.7
800,696 + 12241 mRNA_3873 0.71 0.1
800,729 + 12241 mRNA_3873 0.75 -0.4
800,781 - 12241 mRNA_3873 0.81 -0.2
800,841 - 12241 mRNA_3873 0.88 1.7
800,845 + 12241 mRNA_3873 0.89 0.5
800,881 - -1.0
800,960 - -0.1
801,017 + -0.1
801,111 - -0.4
801,117 + 0.7
801,134 + 12242 mRNA_3874 0.11 -0.1
801,141 + 12242 mRNA_3874 0.12 2.0
801,387 - 12242 mRNA_3874 0.34 0.2
801,414 - 12242 mRNA_3874 0.36 0.2
801,831 + 12242 mRNA_3874 0.74 0.1
801,837 - 12242 mRNA_3874 0.74 -0.7
801,844 + 12242 mRNA_3874 0.75 1.6
801,860 + 12242 mRNA_3874 0.76 -0.9
802,022 + 2.0
802,100 + -1.1
802,102 - 1.0
802,166 + -0.0
802,173 + -0.3
802,867 - 12243 mRNA_3875 0.23 -0.1
802,978 - 12243 mRNA_3875 0.29 3.2
802,988 - 12243 mRNA_3875 0.29 -0.8
803,037 - 12243 mRNA_3875 0.32 -1.4
803,044 + 12243 mRNA_3875 0.32 -0.5
803,047 - 12243 mRNA_3875 0.32 2.3