Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3660

Experiments: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3659: 12027 - Hypothetical Protein, at 283501 to 284501 12027 mRNA_3660: 12028 - HMMPfam-ATPase family associated with various cellular activities (AAA)-PF00004,SUPERFAMILY--SSF52540, at 285259 to 286189 12028 mRNA_3661: 12029 - Hypothetical Protein, at 286182 to 286643 12029 mRNA_3662: 12030 - KOG2768 Translation initiation factor 2, beta subunit (eIF-2beta), at 286767 to 288003 12030

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
284,481 - 1.6
284,664 + 0.2
285,222 - -1.7
285,346 - 2.0
285,366 + 12028 mRNA_3660 0.11 1.7
285,525 + 12028 mRNA_3660 0.29 0.0
285,534 + 12028 mRNA_3660 0.30 -0.9
285,805 + 12028 mRNA_3660 0.59 0.6
286,475 - 12029 mRNA_3661 0.63 0.0
286,530 + 12029 mRNA_3661 0.75 -1.1
286,532 - 12029 mRNA_3661 0.76 0.2
286,536 + 12029 mRNA_3661 0.77 -0.1
286,541 + 12029 mRNA_3661 0.78 0.9
286,545 - 12029 mRNA_3661 0.79 0.3
286,560 + 12029 mRNA_3661 0.82 1.5
286,591 - 12029 mRNA_3661 0.89 0.0
286,706 - 0.8
286,720 + -0.7
286,721 - 0.7
286,767 + -0.2
286,858 + 0.7
286,879 - -0.5
286,890 - 0.1
286,891 + 12030 mRNA_3662 0.10 -1.2
286,922 - 12030 mRNA_3662 0.13 1.6
286,972 - 12030 mRNA_3662 0.17 1.1
286,982 + 12030 mRNA_3662 0.17 0.2
287,010 + 12030 mRNA_3662 0.20 1.6
287,063 - 12030 mRNA_3662 0.24 -0.3
287,063 + 12030 mRNA_3662 0.24 -1.1
287,070 + 12030 mRNA_3662 0.24 2.2
287,079 - 12030 mRNA_3662 0.25 0.3
287,085 - 12030 mRNA_3662 0.26 -2.0
287,092 + 12030 mRNA_3662 0.26 2.9
287,100 + 12030 mRNA_3662 0.27 0.1
287,107 - 12030 mRNA_3662 0.27 -0.9
287,108 + 12030 mRNA_3662 0.28 -0.3