Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3637

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3636: 12004 - K03238 EIF2S2 translation initiation factor 2 subunit 2, at 217154 to 218587 12004 mRNA_3637: 12005 - KOG0730 AAA+-type ATPase, at 218829 to 220926 12005 mRNA_3638: 12006 - KOG1721 FOG Zn-finger, at 221739 to 224481 12006

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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218,719 - -3.0
219,696 + 12005 mRNA_3637 0.41 0.7
219,880 - 12005 mRNA_3637 0.50 -1.1
219,889 - 12005 mRNA_3637 0.51 1.4
220,441 - 12005 mRNA_3637 0.77 0.5
220,753 - 0.6
220,905 + 0.3
221,175 + -2.0
221,604 - -2.5
221,609 + -0.2
221,625 + -0.3
221,629 + -0.7
221,631 + 0.3
221,639 + 0.5
221,639 + 0.1
221,648 + 0.9
221,652 + -0.2
221,803 + 1.0