Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3538

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3538: 11906 - BLAST TPR-like protein [Sanghuangporus baumii], at 2213 to 2737 11906

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1,256 - 0.7
1,278 + -1.8
1,336 + 0.7
1,371 - -0.2
1,404 - 0.5
1,429 + -1.2
1,450 + 0.2
1,528 + -0.4
1,550 + -0.4
1,647 - -0.4
1,653 + 0.7
1,661 - 1.7
1,663 + -0.8
1,719 + 0.8
1,720 + 1.1
1,760 + 0.7
1,814 - 0.2
1,902 - 1.2
1,920 - -1.4
2,174 - 0.4
2,277 + 11906 mRNA_3538 0.12 0.0
2,357 - 11906 mRNA_3538 0.27 -0.8
2,357 - 11906 mRNA_3538 0.27 1.5
2,480 + 11906 mRNA_3538 0.51 -0.1
2,539 - 11906 mRNA_3538 0.62 -1.0
2,566 + 11906 mRNA_3538 0.67 0.9
2,607 + 11906 mRNA_3538 0.75 0.1
2,761 - 0.1
2,818 + -0.7
2,878 + -1.9
2,933 + 1.9
3,007 + 0.0
3,028 - 1.6
3,039 + 0.6
3,046 - 0.9
3,147 + 0.0
3,283 + 0.3
3,288 + 0.6
3,288 - 0.2
3,289 + -1.4
3,341 + 1.3
3,436 + -0.4
3,617 - 0.8
3,721 - -1.2
3,731 - -0.0
3,737 + 1.7
3,737 + 1.5
3,737 + 0.3