Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3249

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3248: 11616 - Hypothetical Protein, at 210155 to 211275 11616 mRNA_3249: 11617 - Hypothetical Protein, at 211752 to 212300 11617 mRNA_3250: 11618 - K00415 QCR2, UQCRC2 ubiquinol-cytochrome c reductase core subunit 2, at 212456 to 214047 11618

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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210,768 - 11616 mRNA_3248 0.55 -0.7
210,898 + 11616 mRNA_3248 0.66 -0.4
210,970 + 11616 mRNA_3248 0.73 -0.0
211,043 - 11616 mRNA_3248 0.79 0.7
211,226 + 0.9
211,241 - 0.2
211,386 - -0.7
211,439 - -1.0
211,621 - 0.7
211,789 - 0.4
211,836 + 11617 mRNA_3249 0.15 0.2
211,920 - 11617 mRNA_3249 0.31 0.9
211,925 - 11617 mRNA_3249 0.32 -0.5
211,930 - 11617 mRNA_3249 0.32 -0.7
211,962 + 11617 mRNA_3249 0.38 0.9
212,064 + 11617 mRNA_3249 0.57 2.0
212,120 + 11617 mRNA_3249 0.67 0.6
212,233 - 11617 mRNA_3249 0.88 0.1
212,242 - 11617 mRNA_3249 0.89 0.5
212,261 - 0.5
212,263 - 0.5
212,267 + 0.4
212,380 + -0.8
212,387 + 1.3
212,387 + 1.2
212,390 - -1.2
212,438 + 0.8
212,441 + 1.0