Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3245

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3244: 11612 - Hypothetical Protein, at 199306 to 200606 11612 mRNA_3245: 11613 - HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550,HMMPfam-Protein of unknown function (DUF3295)-PF11702, at 201066 to 204037 11613

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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200,108 + 11612 mRNA_3244 0.62 0.6
200,206 + 11612 mRNA_3244 0.69 0.8
200,479 + 2.7
200,500 - 1.1
200,515 - 1.5
200,553 - 0.4
200,597 + 0.8
201,006 - -0.1
201,130 - 0.1
202,039 + 11613 mRNA_3245 0.33 -0.2
202,325 + 11613 mRNA_3245 0.42 0.4
202,630 + 11613 mRNA_3245 0.53 1.0
202,767 - 11613 mRNA_3245 0.57 0.6
203,376 - 11613 mRNA_3245 0.78 1.8
203,509 + 11613 mRNA_3245 0.82 0.4
203,657 - 11613 mRNA_3245 0.87 -0.9
203,661 + 11613 mRNA_3245 0.87 0.7
203,790 - 0.8
203,799 - 0.5
203,946 + 1.6
203,947 + 0.6
204,103 - -0.1
204,225 - 0.6
204,225 - -0.3
204,225 - 2.4
204,234 - -0.0
204,235 - 0.0
204,238 + -0.3
204,250 - 0.3
204,251 + 0.5
204,270 + 0.3
204,278 + -2.2
204,280 + 1.3
204,286 - -0.3
204,290 - 1.4
204,291 - -0.4
204,298 + -0.9
204,314 + -2.0
204,335 - 0.6
204,357 - 1.1
204,383 - 0.4
204,393 - 0.6
204,412 + -0.9
204,437 - -1.1
204,443 - 0.5
204,445 + -1.0
204,447 - -0.6
204,448 + 1.9
204,448 - 1.2
204,454 + -0.8
204,454 + 0.5
204,455 - 0.6
204,463 + 0.3
204,468 - -1.2
204,473 + 0.7
204,479 + 0.0
204,484 - 0.9
204,491 - 0.8
204,511 - -0.1
204,528 - 0.6
204,534 - -0.2
204,547 - 0.0
204,557 + -0.4
204,639 + 0.5
204,647 + 2.3
204,652 - 0.9
204,654 + -0.5
204,664 - 2.1
204,665 + -0.4
204,678 + 2.6
204,695 + 1.5
204,699 + 0.2
204,724 - 1.6
204,727 + -0.9
204,801 - 0.8
204,811 + 1.3
204,826 + -1.2
204,957 - 0.5