Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3105

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3105: 11473 - KOG1515 Arylacetamide deacetylase, at 334494 to 336059 11473 mRNA_3106: 11474 - BLAST potential peroxisomal matrix Pex8 protein [Pseudo..., at 336211 to 338758 11474

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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333,499 - 0.5
333,500 + 0.6
333,501 + 0.1
333,501 + -0.3
333,502 + -1.7
333,514 + -0.2
333,516 - 1.1
333,518 - 0.5
333,519 + -0.6
333,520 + 1.0
333,523 - 0.6
333,523 + 1.2
333,532 - -1.3
333,537 + 0.0
333,554 - -0.2
333,582 + 0.2
333,646 - -1.4
333,648 - -0.1
333,653 + 0.0
333,657 + 0.0
333,657 + 0.2
333,662 + 0.6
333,663 - -2.4
333,663 - 0.0
333,664 - 0.4
333,664 + 1.9
333,665 + -0.8
333,666 - -0.4
333,667 - 2.7
333,674 - 1.6
333,675 - 0.2
333,676 - 0.1
333,676 + 0.6
333,676 + 1.4
333,681 - 2.0
333,705 + -0.9
333,706 - 0.6
333,706 - -0.4
333,706 - -0.0
333,706 - 1.2
333,707 - 2.4
333,708 - 0.7
333,708 - 1.1
333,708 - 1.1
333,718 + 0.6
333,718 - 0.7
333,720 - 0.5
333,729 - 0.2
333,730 - 0.8
333,733 - 0.2
333,735 + 1.7
333,749 + 1.4
333,754 - 1.3
333,767 - 0.5
333,768 + -0.3
333,783 + -0.4
333,788 + 1.7
333,798 + 2.8
333,843 + 0.5
333,889 - 0.4
333,889 - 0.8
333,905 - 0.9
333,905 - -0.4
333,906 + 0.2
333,910 - -0.3
333,914 - 0.2
333,915 + 0.0
333,920 + 0.1
333,923 + 0.5
333,925 - 0.8
333,929 + 0.7
333,968 + 0.6
334,021 + 1.0
334,045 - -0.8
334,073 + -0.3
334,086 - 0.3
334,088 + 0.7
334,089 + -0.9
334,107 + -0.4
334,117 + -1.9
334,195 - 0.8
334,207 - -0.1
334,214 - 0.5
334,214 - 0.4
334,217 - 1.2
334,225 + -0.1
334,227 + 3.1
334,228 + 0.3
334,234 - -0.3
334,246 - 1.5
334,248 - 1.7
334,249 + 0.9
334,253 - 0.4
334,259 + 1.3
334,380 + -0.4
334,392 - 0.1
334,427 + 0.1
334,519 - 0.3
334,521 - 0.8
334,523 - 2.0
334,526 + -1.1
334,552 + 0.5
334,555 + -0.3
334,835 + 11473 mRNA_3105 0.22 -0.9
334,970 + 11473 mRNA_3105 0.30 0.8
334,970 - 11473 mRNA_3105 0.30 -0.2
334,983 - 11473 mRNA_3105 0.31 0.2
335,142 - 11473 mRNA_3105 0.41 1.8
335,163 - 11473 mRNA_3105 0.43 0.6
335,744 + 11473 mRNA_3105 0.80 -0.0
335,862 - 11473 mRNA_3105 0.87 1.0
336,033 + 1.1
336,033 - 0.7
336,034 - -0.5
336,036 + 0.4
336,061 - -0.9
336,077 + -0.9
336,140 - 0.5
336,147 - 0.4
336,159 - -0.5
336,161 - -0.1
336,170 - -1.2
336,173 + 2.0
336,175 - -0.5
336,178 + 3.2
336,187 - -0.2
336,190 + -0.4
336,198 + 1.7
336,205 - -0.8
336,205 + 0.4
336,312 - 0.3
336,323 + 0.4
336,327 + -0.8
336,329 + 0.6
336,341 - -4.4
336,345 + 1.3
336,457 - 1.4
336,459 + 0.4
336,481 - 11474 mRNA_3106 0.11 -0.4
336,485 + 11474 mRNA_3106 0.11 -0.7
336,491 - 11474 mRNA_3106 0.11 1.7
336,634 - 11474 mRNA_3106 0.17 -1.3
336,639 + 11474 mRNA_3106 0.17 1.1
336,648 - 11474 mRNA_3106 0.17 0.4
336,649 - 11474 mRNA_3106 0.17 -0.5
336,775 + 11474 mRNA_3106 0.22 0.3
336,787 - 11474 mRNA_3106 0.23 1.9
336,935 + 11474 mRNA_3106 0.28 0.0