Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3092

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3091: 11459 - K13303 SGK2 serum/glucocorticoid-regulated kinase 2, at 296743 to 299433 11459 mRNA_3092: 11460 - KOG4784 Uncharacterized conserved protein, at 300048 to 303992 11460 mRNA_3093: 11461 - Hypothetical Protein, at 304363 to 305282 11461

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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299,218 + 0.8
299,324 - -0.5
299,349 - 0.2
299,472 + 0.5
299,478 - 0.4
299,512 + -1.8
299,627 - -0.9
299,627 - -0.0
299,627 - 0.3
299,633 + -0.2
299,637 - -0.6
299,638 - 0.1
299,638 + -0.3
299,644 + 1.1
299,644 - 0.4
299,648 + 1.9
299,656 - 1.8
299,656 - -0.7
299,783 + 0.7
299,797 + -0.9
299,906 - -2.0
299,974 + 0.8
300,098 - 0.0
300,099 + -0.0
300,110 + -0.2
300,223 - 1.2
300,228 - 0.4
300,246 + -0.1
300,251 + -1.0
300,349 + 0.9
300,531 + 11460 mRNA_3092 0.12 0.4
300,662 + 11460 mRNA_3092 0.16 1.1
300,680 + 11460 mRNA_3092 0.16 0.2
300,683 - 11460 mRNA_3092 0.16 -0.1
300,724 + 11460 mRNA_3092 0.17 0.2
300,843 + 11460 mRNA_3092 0.20 1.1
300,992 - 11460 mRNA_3092 0.24 0.7
301,130 - 11460 mRNA_3092 0.27 -0.3
301,136 - 11460 mRNA_3092 0.28 -0.8
301,154 + 11460 mRNA_3092 0.28 0.5
301,158 + 11460 mRNA_3092 0.28 0.2
301,326 + 11460 mRNA_3092 0.32 0.3
301,427 + 11460 mRNA_3092 0.35 -0.6
301,432 - 11460 mRNA_3092 0.35 0.6
301,433 + 11460 mRNA_3092 0.35 0.2
301,434 + 11460 mRNA_3092 0.35 -0.9
301,587 - 11460 mRNA_3092 0.39 0.9
301,597 + 11460 mRNA_3092 0.39 -0.7
301,687 - 11460 mRNA_3092 0.42 -0.8
301,729 - 11460 mRNA_3092 0.43 -0.1
301,864 - 11460 mRNA_3092 0.46 1.4
302,350 - 11460 mRNA_3092 0.58 2.1
302,428 + 11460 mRNA_3092 0.60 -1.3
302,600 - 11460 mRNA_3092 0.65 -1.0
302,747 + 11460 mRNA_3092 0.68 2.3
302,892 + 11460 mRNA_3092 0.72 0.3
302,902 + 11460 mRNA_3092 0.72 -0.2
303,036 - 11460 mRNA_3092 0.76 -1.2
303,178 - 11460 mRNA_3092 0.79 1.2
303,285 - 11460 mRNA_3092 0.82 -1.1
303,328 - 11460 mRNA_3092 0.83 0.4
303,353 + 11460 mRNA_3092 0.84 0.3
303,449 - 11460 mRNA_3092 0.86 1.1
303,458 + 11460 mRNA_3092 0.86 0.1
303,460 + 11460 mRNA_3092 0.86 -0.4
303,477 + 11460 mRNA_3092 0.87 0.8
303,576 + 11460 mRNA_3092 0.89 1.4
303,606 - 0.4
303,607 + 0.7
303,610 - 1.4
303,614 - 1.2
303,643 + 1.8
303,744 - 1.2
303,748 - 0.4
303,749 + -0.0
303,760 - 0.4
303,760 + -0.9
303,766 + 0.3
303,891 - -0.2
303,898 - 1.5
304,033 + 0.8
304,038 - 0.7
304,038 + 0.1
304,041 - 0.4
304,045 - 0.4
304,046 + -1.3
304,052 + 1.1
304,054 - 1.2
304,166 - 0.3
304,222 + 0.5
304,371 + 1.1
304,445 + 1.1
304,482 + 11461 mRNA_3093 0.13 0.3
304,494 + 11461 mRNA_3093 0.14 0.1
304,599 + 11461 mRNA_3093 0.26 0.8
304,609 - 11461 mRNA_3093 0.27 1.2
304,687 - 11461 mRNA_3093 0.35 -0.5
304,695 + 11461 mRNA_3093 0.36 1.2
304,753 + 11461 mRNA_3093 0.42 0.1
304,926 - 11461 mRNA_3093 0.61 0.3
304,959 + 11461 mRNA_3093 0.65 0.7