Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
1 + 0.5
1 + -1.3
1 + -1.3
21 + 1.1
21 + 0.3
21 + -0.8
41 + 0.8
42 + -0.1
44 + 2.8
79 - 0.1
79 + 1.6
149 - 3.5
264 + 11348 mRNA_2980 0.17 2.1
266 - 11348 mRNA_2980 0.17 0.2
338 - 11348 mRNA_2980 0.22 0.8
341 + 11348 mRNA_2980 0.22 0.5
454 - 11348 mRNA_2980 0.30 4.7
484 - 11348 mRNA_2980 0.32 1.1
489 - 11348 mRNA_2980 0.33 -0.0
491 + 11348 mRNA_2980 0.33 1.3
507 + 11348 mRNA_2980 0.34 0.9
510 + 11348 mRNA_2980 0.34 0.9
516 - 11348 mRNA_2980 0.35 0.4
654 + 11348 mRNA_2980 0.44 0.4
719 + 11348 mRNA_2980 0.49 2.3
1,007 + 11348 mRNA_2980 0.69 0.1
1,048 - 11348 mRNA_2980 0.72 0.4
1,218 - 11348 mRNA_2980 0.84 0.3
1,248 + 11348 mRNA_2980 0.86 0.5
1,364 + 1.8
1,374 - -0.7
1,401 + 2.7
1,452 + 0.4
1,488 - 0.7
1,503 + 0.5
1,513 + 0.6
1,515 - 0.1
1,551 + -2.0
1,634 + 0.1
1,635 + 1.1
1,657 + 0.2
1,668 + 0.0
1,805 - 1.0
1,805 + 0.6
1,818 + 0.3
1,882 + 0.0
1,934 + -0.2
1,948 + -0.8
1,949 - 0.4
1,974 + -0.4
1,992 + -0.2
1,992 + 2.2
1,993 + 1.3
2,011 + 1.3
2,082 + 0.3
2,084 - -0.9
2,086 + -1.9
2,086 + -0.5
2,086 + -1.6
2,095 + 0.3
2,097 - 2.0
2,098 + 1.6
2,115 + -0.2
2,117 + 2.7
2,120 + 1.2
2,121 - 0.3
2,121 - 1.0
2,125 - 1.1
2,126 + 1.2
2,131 + -1.3
2,131 + 0.8
2,131 + -0.1
2,133 + 0.3
2,243 + 2.1
2,265 + 2.3
2,301 + 0.0
2,320 + 1.1
2,324 - -1.1
2,357 + 0.2