Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2971

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2970: 11338 - K00219 fadH 2,4-dienoyl-CoA reductase (NADPH2), at 682650 to 684031 11338 mRNA_2971: 11339 - HMMPfam-Anp1-PF03452,SUPERFAMILY--SSF53448, at 684112 to 685866 11339 mRNA_2972: 11340 - K03850 ALG10 alpha-1,2-glucosyltransferase, at 686136 to 688131 11340

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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683,199 - 11338 mRNA_2970 0.40 0.1
683,290 + 11338 mRNA_2970 0.46 -0.6
683,293 - 11338 mRNA_2970 0.47 0.6
683,302 + 11338 mRNA_2970 0.47 -0.7
683,322 - 11338 mRNA_2970 0.49 -1.0
683,407 - 11338 mRNA_2970 0.55 0.6
683,407 - 11338 mRNA_2970 0.55 -0.2
683,408 - 11338 mRNA_2970 0.55 0.5
683,421 + 11338 mRNA_2970 0.56 0.0
683,429 - 11338 mRNA_2970 0.56 0.7
683,595 - 11338 mRNA_2970 0.68 0.1
683,752 + 11338 mRNA_2970 0.80 1.1
683,787 + 11338 mRNA_2970 0.82 1.4
683,795 - 11338 mRNA_2970 0.83 0.7
683,798 + 11338 mRNA_2970 0.83 -0.0
683,844 - 11338 mRNA_2970 0.86 0.7
683,862 + 11338 mRNA_2970 0.88 0.8
683,865 - 11338 mRNA_2970 0.88 0.1
683,896 - 0.4
684,027 - -1.0
684,083 + -0.7
684,294 - 11339 mRNA_2971 0.10 2.0
684,354 + 11339 mRNA_2971 0.14 0.3
684,498 + 11339 mRNA_2971 0.22 2.1
684,604 + 11339 mRNA_2971 0.28 0.2
684,633 + 11339 mRNA_2971 0.30 0.1
684,642 - 11339 mRNA_2971 0.30 0.4
684,653 - 11339 mRNA_2971 0.31 0.8
684,673 + 11339 mRNA_2971 0.32 -0.4
684,778 + 11339 mRNA_2971 0.38 0.9
684,788 - 11339 mRNA_2971 0.39 -0.5
684,816 - 11339 mRNA_2971 0.40 -0.3
684,816 - 11339 mRNA_2971 0.40 0.5
684,819 + 11339 mRNA_2971 0.40 -2.1
684,926 + 11339 mRNA_2971 0.46 1.8
684,968 - 11339 mRNA_2971 0.49 2.7
685,026 - 11339 mRNA_2971 0.52 -0.4
685,026 - 11339 mRNA_2971 0.52 -0.3
685,029 - 11339 mRNA_2971 0.52 1.0
685,174 - 11339 mRNA_2971 0.61 -0.7
685,357 - 11339 mRNA_2971 0.71 1.8
685,368 + 11339 mRNA_2971 0.72 1.3
685,374 - 11339 mRNA_2971 0.72 -0.2
685,392 + 11339 mRNA_2971 0.73 0.8
685,496 - 11339 mRNA_2971 0.79 -0.0
685,536 + 11339 mRNA_2971 0.81 2.0
685,597 + 11339 mRNA_2971 0.85 -1.2
685,598 + 11339 mRNA_2971 0.85 -1.3
685,599 - 11339 mRNA_2971 0.85 1.1
685,601 - 11339 mRNA_2971 0.85 1.2
685,601 - 11339 mRNA_2971 0.85 1.4
685,641 - 11339 mRNA_2971 0.87 0.8
685,687 - 11339 mRNA_2971 0.90 0.9
685,688 - 11339 mRNA_2971 0.90 0.4
685,697 - 0.4
685,756 - 1.1
685,778 + 0.8
685,785 + 0.5
685,801 - 2.1
685,812 + 1.2
685,854 + 0.0
685,905 - -2.0
685,958 + -0.1
685,967 + -0.0
685,974 - 0.9
686,118 - 0.1
686,119 - 1.0
686,164 + 1.9
686,164 + 0.5
686,218 - -0.8
686,221 - -0.9
686,281 - -1.5
686,286 + 1.1
686,460 + 11340 mRNA_2972 0.16 0.3
686,503 - 11340 mRNA_2972 0.18 -0.1
686,542 + 11340 mRNA_2972 0.20 0.1
686,744 - 11340 mRNA_2972 0.30 -1.2