Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2866

Experiments: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2865: 11233 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 395366 to 397041 11233 mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397410 to 402844 11234 mRNA_2867: 11235 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 403264 to 404865 11235

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
396,697 + 11233 mRNA_2865 0.79 -1.7
397,095 + -0.5
397,316 - 1.6
397,472 - 0.7
398,420 - 11234 mRNA_2866 0.19 -0.4
398,551 - 11234 mRNA_2866 0.21 0.3
398,663 + 11234 mRNA_2866 0.23 0.6
398,737 + 11234 mRNA_2866 0.24 -0.3
398,860 - 11234 mRNA_2866 0.27 1.5
398,986 - 11234 mRNA_2866 0.29 0.9
399,018 + 11234 mRNA_2866 0.30 -1.7
399,273 + 11234 mRNA_2866 0.34 0.5
399,335 - 11234 mRNA_2866 0.35 0.9
399,432 - 11234 mRNA_2866 0.37 -0.1
399,471 - 11234 mRNA_2866 0.38 0.2
399,706 - 11234 mRNA_2866 0.42 -0.7
399,876 + 11234 mRNA_2866 0.45 1.2
399,878 + 11234 mRNA_2866 0.45 -0.6
400,153 - 11234 mRNA_2866 0.50 0.7
400,597 - 11234 mRNA_2866 0.59 0.4
400,718 - 11234 mRNA_2866 0.61 2.0
400,750 + 11234 mRNA_2866 0.61 1.1
400,752 - 11234 mRNA_2866 0.61 0.8
400,754 + 11234 mRNA_2866 0.62 -0.1
400,795 - 11234 mRNA_2866 0.62 1.7
400,806 + 11234 mRNA_2866 0.62 0.3
401,063 - 11234 mRNA_2866 0.67 1.2
401,077 + 11234 mRNA_2866 0.67 0.0
401,455 + 11234 mRNA_2866 0.74 2.2
401,667 - 11234 mRNA_2866 0.78 0.2
401,815 + 11234 mRNA_2866 0.81 -0.3
401,845 + 11234 mRNA_2866 0.82 1.8
402,206 + 11234 mRNA_2866 0.88 -0.9
402,208 - 11234 mRNA_2866 0.88 0.3
402,238 - 11234 mRNA_2866 0.89 -1.2
402,248 - 11234 mRNA_2866 0.89 -0.5
402,251 + 11234 mRNA_2866 0.89 0.5
402,385 - -0.2
402,389 + -0.1
402,527 + -1.0
402,680 + -0.3
402,973 - 0.7
402,977 + 0.2
403,015 - 2.2
403,389 - 0.5
403,578 + 11235 mRNA_2867 0.20 -0.7