Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2831

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2830: 11198 - BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag..., at 315328 to 317739 11198 mRNA_2831: 11199 - HMMPfam-short chain dehydrogenase-PF00106,PRINTS-Glucose/ribitol dehydrogenase family signature-PR00081,SMART--SM00822,SUPERFAMILY--SSF51735, at 318054 to 319183 11199 mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319587 to 320810 11200

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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317,213 - 11198 mRNA_2830 0.78 -0.7
317,493 + 11198 mRNA_2830 0.90 0.3
317,635 + 0.1
318,085 + -0.1
318,275 + 11199 mRNA_2831 0.20 0.1
318,672 + 11199 mRNA_2831 0.55 1.0
318,879 - 11199 mRNA_2831 0.73 1.7
319,034 - 11199 mRNA_2831 0.87 0.9
319,255 - -0.9
319,302 + 0.4
319,520 - -0.3
319,660 - 1.5
319,846 - 11200 mRNA_2832 0.21 2.5
320,178 - 11200 mRNA_2832 0.48 -0.9