Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2686

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2686: 11054 - Interpro Fungal potassium channel 0, at 510 to 3087 11054 mRNA_2687: 11055 - K16542 CDK5RAP2 CDK5 regulatory subunit-associated protein 2, at 3683 to 8144 11055

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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1 + 0.6
28 + 0.3
28 + -0.4
37 + -1.0
37 + 0.3
38 + -0.9
44 + -0.2
48 - -0.5
49 + -1.3
49 + 1.0
49 + -0.9
49 + -1.3
49 + 0.1
49 + -0.8
49 - -1.6
52 + -0.6
54 - 0.7
54 - 2.8
58 + 0.8
62 + -1.9
70 - -0.2
73 + 0.1
74 - 0.1
74 + 2.1
112 - -0.7
120 - 0.7
138 + 0.1
142 + -0.5
142 + 1.3
142 + 0.2
144 + -0.3
145 - 0.5
147 + 1.3
152 + 2.5
159 + 0.5
159 - 0.7
163 + 0.2
169 - 0.1
170 + -0.1
171 - 0.4
173 + 1.2
175 - -0.3
176 + -1.1
177 + 1.0
183 + -1.0
193 + -0.5
205 + -1.7
231 + 1.2
232 + -4.8
235 - 0.3
252 - -0.0
259 + 0.3
259 + 0.9
259 + 0.5
262 - -0.3
269 + 0.3
273 + 0.1
275 - 1.9
289 + 1.9
299 + 0.5
312 - -0.7
339 + -0.9
352 + 1.4
357 + -0.8
358 + 1.9
368 - -0.5
417 - -2.2
429 + 0.3
434 + 0.0
445 + -0.8
462 + 0.8
462 + 1.1
502 + -0.5
529 - 0.5
540 - -0.6
561 + -0.4
584 + 0.2
584 - -0.5
584 + -0.6
633 + -0.7
636 + -1.4
646 + 0.5
703 - -1.0
736 - -0.2
772 - 11054 mRNA_2686 0.10 -0.8
845 - 11054 mRNA_2686 0.13 0.4
871 + 11054 mRNA_2686 0.14 3.2
911 + 11054 mRNA_2686 0.16 0.1
919 - 11054 mRNA_2686 0.16 -1.5
922 + 11054 mRNA_2686 0.16 0.1
937 - 11054 mRNA_2686 0.17 0.3
946 - 11054 mRNA_2686 0.17 1.0
1,039 + 11054 mRNA_2686 0.21 0.8
1,042 - 11054 mRNA_2686 0.21 2.0
1,056 + 11054 mRNA_2686 0.21 1.4
1,056 + 11054 mRNA_2686 0.21 -0.6
1,059 - 11054 mRNA_2686 0.21 -0.3
1,059 - 11054 mRNA_2686 0.21 -0.1
1,079 + 11054 mRNA_2686 0.22 0.8
1,089 + 11054 mRNA_2686 0.22 0.4
1,090 - 11054 mRNA_2686 0.22 -0.8
1,099 - 11054 mRNA_2686 0.23 -0.6
1,116 - 11054 mRNA_2686 0.24 1.9
1,219 - 11054 mRNA_2686 0.28 1.4
1,230 + 11054 mRNA_2686 0.28 -0.4
1,258 - 11054 mRNA_2686 0.29 -1.2
1,270 - 11054 mRNA_2686 0.29 0.1
1,272 + 11054 mRNA_2686 0.30 0.2
1,324 + 11054 mRNA_2686 0.32 0.9
1,351 + 11054 mRNA_2686 0.33 -0.2
1,464 + 11054 mRNA_2686 0.37 0.6
1,508 + 11054 mRNA_2686 0.39 2.0
1,514 - 11054 mRNA_2686 0.39 0.8
1,611 + 11054 mRNA_2686 0.43 0.4
1,642 + 11054 mRNA_2686 0.44 -0.1
1,671 + 11054 mRNA_2686 0.45 -0.4
1,680 + 11054 mRNA_2686 0.45 -0.5
1,683 - 11054 mRNA_2686 0.46 1.2
1,684 + 11054 mRNA_2686 0.46 0.8
1,699 + 11054 mRNA_2686 0.46 2.9
1,836 + 11054 mRNA_2686 0.51 -0.2
1,912 + 11054 mRNA_2686 0.54 -1.6
1,961 - 11054 mRNA_2686 0.56 0.7
2,068 - 11054 mRNA_2686 0.60 1.8
2,071 - 11054 mRNA_2686 0.61 1.2
2,079 + 11054 mRNA_2686 0.61 -0.3
2,096 - 11054 mRNA_2686 0.62 0.2
2,112 + 11054 mRNA_2686 0.62 -0.0
2,128 + 11054 mRNA_2686 0.63 0.1
2,140 + 11054 mRNA_2686 0.63 -0.7
2,141 - 11054 mRNA_2686 0.63 1.4
2,158 + 11054 mRNA_2686 0.64 0.6
2,196 + 11054 mRNA_2686 0.65 -0.0
2,238 + 11054 mRNA_2686 0.67 2.1
2,250 - 11054 mRNA_2686 0.67 2.0
2,271 + 11054 mRNA_2686 0.68 -0.1
2,404 - 11054 mRNA_2686 0.73 -0.8
2,419 + 11054 mRNA_2686 0.74 0.4
2,442 - 11054 mRNA_2686 0.75 0.1
2,444 - 11054 mRNA_2686 0.75 -0.0
2,534 - 11054 mRNA_2686 0.79 0.0
2,547 - 11054 mRNA_2686 0.79 -1.6
2,564 + 11054 mRNA_2686 0.80 0.2
2,685 - 11054 mRNA_2686 0.84 0.1
2,806 + 11054 mRNA_2686 0.89 1.3
2,806 - 11054 mRNA_2686 0.89 -1.9
2,814 - 11054 mRNA_2686 0.89 -1.2
2,938 + 1.7
2,971 + -2.2
2,984 - 1.0
3,056 - 0.8
3,090 + 0.1
3,127 + 0.3
3,135 - 1.8
3,141 + -0.2
3,282 + 0.2
3,380 + 0.2
3,409 - 0.3