Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2630

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2629: 10997 - Hypothetical Protein, at 628565 to 629191 10997 mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998 mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632765 to 634825 10999

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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628,477 - -1.0
628,531 - 1.6
628,717 - 10997 mRNA_2629 0.24 -0.5
628,805 - 10997 mRNA_2629 0.38 -0.9
628,947 + 10997 mRNA_2629 0.61 0.6
628,970 - 10997 mRNA_2629 0.65 0.4
628,971 - 10997 mRNA_2629 0.65 -1.9
629,017 - 10997 mRNA_2629 0.72 -0.8
629,095 - 10997 mRNA_2629 0.85 0.1
629,107 - 10997 mRNA_2629 0.86 2.5
629,121 - 10997 mRNA_2629 0.89 -1.4
629,130 + -0.9
629,155 - -0.7
629,181 - -1.1
629,183 + -1.9
629,193 - 2.2
629,223 - 1.2
629,234 + -0.3
629,238 + -2.2
629,238 + 0.4
629,241 + 0.5
629,242 + -0.3
629,254 - -1.0
629,254 + 1.4
629,255 - -0.3
629,260 - -2.2
629,261 + -0.5
629,261 + 0.0
629,267 - 1.6
629,276 + 0.2
629,282 - 0.8
629,285 - 1.0
629,287 - 1.5
629,295 + 0.6
629,313 - -0.5
629,314 + -0.7
629,393 + -1.3
629,426 - 1.2
629,555 - 0.8
629,755 + 10998 mRNA_2630 0.11 0.1
629,760 + 10998 mRNA_2630 0.11 -0.1
629,774 + 10998 mRNA_2630 0.11 -0.1
629,876 - 10998 mRNA_2630 0.15 -0.3
629,890 + 10998 mRNA_2630 0.15 2.1
629,916 - 10998 mRNA_2630 0.16 -0.6
629,920 - 10998 mRNA_2630 0.16 -0.1
630,150 - 10998 mRNA_2630 0.25 -0.4
630,154 - 10998 mRNA_2630 0.25 0.1
630,443 - 10998 mRNA_2630 0.35 1.8
630,607 + 10998 mRNA_2630 0.41 0.3
630,868 - 10998 mRNA_2630 0.50 -0.0
631,065 - 10998 mRNA_2630 0.57 0.6
631,183 - 10998 mRNA_2630 0.61 -3.3
631,200 - 10998 mRNA_2630 0.62 -0.5
631,301 + 10998 mRNA_2630 0.65 0.8
631,502 + 10998 mRNA_2630 0.72 -0.2
631,598 + 10998 mRNA_2630 0.76 -1.6
631,694 - 10998 mRNA_2630 0.79 -0.5
631,707 + 10998 mRNA_2630 0.79 -1.7
631,782 + 10998 mRNA_2630 0.82 -0.7
631,877 + 10998 mRNA_2630 0.85 0.6
631,898 - 10998 mRNA_2630 0.86 -1.4
631,935 - 10998 mRNA_2630 0.88 1.8
632,336 - 0.7
632,340 + 0.3
632,349 - 1.8
632,383 + -0.4
632,474 - 0.0
632,477 - -0.3
632,732 - 2.8
632,735 - 1.1
632,736 + 0.4
633,064 + 10999 mRNA_2631 0.15 0.3
633,084 + 10999 mRNA_2631 0.15 0.1