Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2622

Experiments: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2621: 10989 - K01711 gmd, GMDS GDPmannose 4,6-dehydratase, at 611391 to 613373 10989 mRNA_2622: 10990 - BLAST expressed protein [Schizophyllum commune H4-8], at 613719 to 614794 10990 mRNA_2623: 10991 - K00306 PIPOX sarcosine oxidase / L-pipecolate oxidase, at 615105 to 616887 10991

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
612,757 - 10989 mRNA_2621 0.69 1.7
612,769 - 10989 mRNA_2621 0.69 0.2
612,773 - 10989 mRNA_2621 0.70 -0.0
613,053 - 10989 mRNA_2621 0.84 0.4
613,083 + 10989 mRNA_2621 0.85 -0.2
613,213 - 0.3
613,369 - 1.0
613,463 - -0.5
613,465 - -0.6
613,466 + 0.3
613,480 - -0.1
613,514 + -1.1
613,514 - -1.5
613,516 - 1.0
613,521 + 0.3
613,530 + 1.0
613,658 + 2.0
613,788 - 1.6
613,865 + 10990 mRNA_2622 0.14 -0.4
613,946 - 10990 mRNA_2622 0.21 -0.4
614,053 + 10990 mRNA_2622 0.31 -0.0
614,539 - 10990 mRNA_2622 0.76 0.0
614,679 - 10990 mRNA_2622 0.89 1.0
614,828 + 0.5
614,845 + 1.8
614,968 - 1.5
615,035 + 0.5
615,040 + -0.1
615,141 + 1.0
615,147 - -0.8
615,158 + -0.6
615,160 - 0.1
615,166 - -2.1
615,174 + 1.0
615,313 - 10991 mRNA_2623 0.12 0.7
615,351 + 10991 mRNA_2623 0.14 -1.7
615,470 + 10991 mRNA_2623 0.20 -0.5
615,479 - 10991 mRNA_2623 0.21 0.5
615,739 - 10991 mRNA_2623 0.36 -0.3
615,764 + 10991 mRNA_2623 0.37 0.5
615,766 + 10991 mRNA_2623 0.37 0.1