Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2620

Experiments: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2619: 10987 - Hypothetical Protein, at 608244 to 608759 10987 mRNA_2620: 10988 - ProSiteProfiles-Filamin/ABP280 repeat profile.-PS50194,SUPERFAMILY--SSF81296, at 609303 to 611052 10988 mRNA_2621: 10989 - K01711 gmd, GMDS GDPmannose 4,6-dehydratase, at 611391 to 613373 10989

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
608,388 + 10987 mRNA_2619 0.28 0.7
608,396 - 10987 mRNA_2619 0.29 -0.4
608,484 - 10987 mRNA_2619 0.47 -0.7
608,486 - 10987 mRNA_2619 0.47 -0.0
608,486 + 10987 mRNA_2619 0.47 -0.6
608,511 - 10987 mRNA_2619 0.52 -0.2
608,516 - 10987 mRNA_2619 0.53 0.5
608,655 - 10987 mRNA_2619 0.80 1.6
608,658 - 10987 mRNA_2619 0.80 0.4
608,663 - 10987 mRNA_2619 0.81 0.5
608,673 + 10987 mRNA_2619 0.83 -1.2
608,688 - 10987 mRNA_2619 0.86 0.4
608,787 + -0.5
608,794 - 1.2
608,795 + 0.6
608,804 - 0.9
608,819 + 0.4
608,837 - -0.1
608,913 + -0.4
608,936 - 1.0
608,942 - 0.4
608,945 - 1.6
608,946 - -1.5
608,947 + -0.6
608,950 - -1.0
608,952 - -0.0
608,953 - -0.2
608,953 + 1.0
608,954 - -0.4
608,958 - -0.1
608,968 + 1.5
609,004 + -0.1
609,014 + -0.3
609,030 + 0.5
609,031 + -1.0
609,069 + 0.0
609,073 + -0.0
609,109 + 0.8
609,209 + 0.9
609,213 - -0.8
609,240 + 1.1
609,250 + 1.3
609,253 + -1.3
609,257 + -0.0
609,263 - 0.6
609,265 - 0.7
609,276 + -0.3
609,366 + -0.5
609,367 - 0.0
609,371 - -0.6
609,379 + -0.2
609,380 - 0.8
609,380 - 0.4
609,382 + 0.2
609,384 - 0.2
609,385 + -0.7
609,399 - 0.3
609,405 - -2.0
609,407 - 0.4
609,416 + -1.6
609,416 - 0.3
609,448 + -1.2
609,526 - 10988 mRNA_2620 0.13 0.2
609,528 + 10988 mRNA_2620 0.13 -0.0
609,537 - 10988 mRNA_2620 0.13 1.5
609,540 + 10988 mRNA_2620 0.14 -0.9
609,546 - 10988 mRNA_2620 0.14 0.0
609,548 + 10988 mRNA_2620 0.14 1.2
609,548 - 10988 mRNA_2620 0.14 -0.6
609,550 + 10988 mRNA_2620 0.14 0.6
609,562 + 10988 mRNA_2620 0.15 -0.3
609,562 + 10988 mRNA_2620 0.15 2.2
609,563 + 10988 mRNA_2620 0.15 -3.7
609,565 + 10988 mRNA_2620 0.15 0.5
609,567 + 10988 mRNA_2620 0.15 0.1
609,573 - 10988 mRNA_2620 0.15 1.6
609,577 + 10988 mRNA_2620 0.16 0.4
609,593 + 10988 mRNA_2620 0.17 -0.4
609,679 + 10988 mRNA_2620 0.21 -0.6
609,688 - 10988 mRNA_2620 0.22 0.8
609,691 + 10988 mRNA_2620 0.22 1.5
609,694 + 10988 mRNA_2620 0.22 0.0
609,701 - 10988 mRNA_2620 0.23 1.6
609,704 - 10988 mRNA_2620 0.23 -0.6
609,721 - 10988 mRNA_2620 0.24 1.4
609,725 + 10988 mRNA_2620 0.24 0.6
609,771 + 10988 mRNA_2620 0.27 -1.6
609,838 + 10988 mRNA_2620 0.31 0.2
609,858 + 10988 mRNA_2620 0.32 0.4
610,005 - 10988 mRNA_2620 0.40 0.7
610,134 - 10988 mRNA_2620 0.47 0.7
610,161 - 10988 mRNA_2620 0.49 1.9
610,424 - 10988 mRNA_2620 0.64 -0.4
610,453 - 10988 mRNA_2620 0.66 -0.8
610,570 - 10988 mRNA_2620 0.72 -0.3
610,864 + 10988 mRNA_2620 0.89 -0.6
610,881 - -0.5
610,885 + -0.6
610,901 - 0.3
611,012 - 0.4
611,025 + -1.1
611,106 + 0.5
611,132 - 0.5
611,143 - 0.6
611,153 - 0.2
611,153 - 0.2
611,153 - 1.0
611,162 + 1.2
611,164 - 0.1
611,165 + -0.3
611,166 + -0.1
611,180 + 0.0
611,182 - 2.3
611,182 + 0.7
611,183 - 0.8
611,184 - 0.2
611,184 - 1.2
611,184 - 1.6
611,190 - 0.6
611,194 + 0.5
611,199 + 0.3
611,199 + 1.0
611,209 + -0.2
611,209 + 0.0
611,210 + -0.5
611,210 + -0.8
611,210 - 0.9
611,211 + -2.1
611,245 + 1.4
611,246 - 0.4
611,246 - 0.6
611,252 + 0.9
611,254 + 0.4
611,263 + 0.3
611,265 + 0.2
611,300 - -1.3
611,302 - -0.6
611,314 + 2.3
611,314 - 0.6
611,316 - 0.8
611,320 - 0.2
611,330 + 0.5
611,332 + -1.3
611,334 + 0.6
611,338 - -4.1
611,341 - 0.7
611,355 - 1.1
611,363 + 1.5
611,455 - 1.2
611,476 + 0.5
611,612 + 10989 mRNA_2621 0.11 0.4
611,614 - 10989 mRNA_2621 0.11 1.1
611,632 - 10989 mRNA_2621 0.12 1.4
611,632 - 10989 mRNA_2621 0.12 0.2
611,682 - 10989 mRNA_2621 0.15 1.5
611,746 - 10989 mRNA_2621 0.18 0.4
611,748 - 10989 mRNA_2621 0.18 0.6
611,749 - 10989 mRNA_2621 0.18 0.9
611,773 + 10989 mRNA_2621 0.19 -0.6
611,792 + 10989 mRNA_2621 0.20 0.9
611,793 - 10989 mRNA_2621 0.20 1.3
611,805 - 10989 mRNA_2621 0.21 0.7
611,812 + 10989 mRNA_2621 0.21 -0.2
611,819 - 10989 mRNA_2621 0.22 -0.4
611,848 + 10989 mRNA_2621 0.23 0.7
611,891 - 10989 mRNA_2621 0.25 1.2
611,906 - 10989 mRNA_2621 0.26 0.5
611,929 - 10989 mRNA_2621 0.27 0.7
611,982 + 10989 mRNA_2621 0.30 0.1
612,051 - 10989 mRNA_2621 0.33 -1.6