Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2468

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2468: 10836 - HMMPfam-Protein of unknown function (DUF3605)-PF12239, at 219439 to 220603 10836 mRNA_2469: 10837 - K12479 VPS45 vacuolar protein sorting-associated protein 45, at 220878 to 223726 10837

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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218,456 + 1.0
218,482 - 0.4
218,506 + -0.6
218,507 - -0.6
218,561 + 0.9
218,561 + 1.4
218,570 + 2.1
218,573 + -0.2
218,594 + 1.2
218,609 - 0.7
218,642 - 0.2
218,651 + -0.7
218,657 - 0.1
218,659 + -0.2
218,671 - 1.6
218,677 - 1.5
218,747 - 0.1
218,766 - 0.4
218,788 - -0.3
218,794 - 0.1
218,802 + 0.5
218,817 - 0.3
218,830 + 1.5
218,924 - -0.5
218,926 + -0.3
218,947 - 0.9
218,951 - 0.8
218,952 - -0.3
218,954 - -2.2
218,961 - 0.4
218,962 - -2.4
218,969 + -0.1
219,087 - -0.0
219,229 - 0.1
219,239 - 0.3
219,260 + -0.2
219,260 + -0.2
219,260 + 0.4
219,264 - 0.3
219,369 + 0.2
219,373 + 0.5
219,387 - -0.1
219,393 + -1.1
219,402 + 0.9
219,946 - 10836 mRNA_2468 0.44 -1.0
220,084 + 10836 mRNA_2468 0.55 1.2
220,375 - 10836 mRNA_2468 0.80 -0.5
220,391 - 10836 mRNA_2468 0.82 0.0
220,498 - -0.4
220,539 + -1.0
220,608 - 1.4
220,650 - -0.1
220,651 + -0.7
220,823 + 0.0
220,995 - 0.1