Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2204

Experiments: Dropout Complete

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2203: 10571 - K13339 PEX6, PXAAA1 peroxin-6, at 343203 to 347570 10571 mRNA_2204: 10572 - K03786 aroQ, qutE 3-dehydroquinate dehydratase II, at 347838 to 348942 10572 mRNA_2205: 10573 - KOG0381 HMG box-containing protein, at 349439 to 350135 10573

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
remove
347,602 - 0.1
347,606 - 1.6
347,619 + 0.8
347,619 - -1.0
347,624 + -0.2
347,624 - -0.2
347,630 - 1.2
347,685 - 0.3
347,701 - 0.7
347,705 + 1.1
347,743 - 0.5
347,744 + 0.1
347,754 - -0.4
347,759 + 1.7
347,759 + -0.5
347,761 - -1.3
347,779 - -1.8
347,800 + -1.0
347,879 - -0.5
347,892 - 0.0
347,895 + -0.7
348,042 + 10572 mRNA_2204 0.18 -0.4
348,166 + 10572 mRNA_2204 0.30 0.3
348,193 - 10572 mRNA_2204 0.32 0.5
348,195 - 10572 mRNA_2204 0.32 1.0
349,458 - 1.0
349,479 - -1.9
349,489 - 0.1
349,639 - 10573 mRNA_2205 0.29 2.5
349,759 - 10573 mRNA_2205 0.46 -1.2