Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2142

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2142: 10510 - Hypothetical Protein, at 179044 to 180564 10510 mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180912 to 181824 10511

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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178,189 + 0.6
178,428 - 2.0
178,468 - 0.2
178,518 - 0.7
178,934 + -0.1
178,936 - -0.1
179,026 + 0.1
179,027 - 0.3
179,150 - 0.5
179,150 - -0.7
179,342 + 10510 mRNA_2142 0.20 1.2
179,344 - 10510 mRNA_2142 0.20 -0.7
179,373 - 10510 mRNA_2142 0.22 1.7
179,373 - 10510 mRNA_2142 0.22 -3.6
179,787 - 10510 mRNA_2142 0.49 -1.0
180,045 - 10510 mRNA_2142 0.66 0.8
180,054 + 10510 mRNA_2142 0.66 0.6
180,093 + 10510 mRNA_2142 0.69 0.1
180,201 - 10510 mRNA_2142 0.76 0.5
180,327 - 10510 mRNA_2142 0.84 -1.2
180,932 + -0.7
180,977 - -0.2
180,981 - 0.6
181,178 - 10511 mRNA_2143 0.29 -0.7
181,179 - 10511 mRNA_2143 0.29 0.0
181,185 + 10511 mRNA_2143 0.30 0.6
181,197 - 10511 mRNA_2143 0.31 -0.7
181,215 - 10511 mRNA_2143 0.33 0.3
181,254 - 10511 mRNA_2143 0.37 -0.2
181,309 + 10511 mRNA_2143 0.43 0.4
181,315 + 10511 mRNA_2143 0.44 -0.4
181,323 + 10511 mRNA_2143 0.45 -1.8
181,332 - 10511 mRNA_2143 0.46 1.1
181,394 - 10511 mRNA_2143 0.53 0.1