Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2118

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2117: 10485 - Hypothetical Protein, at 112509 to 114471 10485 mRNA_2118: 10486 - KOG0254 Predicted transporter (major facilitator superfamily), at 114569 to 117029 10486 mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117592 to 119082 10487

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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114,004 + 10485 mRNA_2117 0.76 0.5
114,196 - 10485 mRNA_2117 0.86 -1.0
114,203 + 10485 mRNA_2117 0.86 -0.3
114,206 - 10485 mRNA_2117 0.86 -0.1
114,433 + -0.2
114,465 - 0.8
114,471 + 0.2
114,575 - -0.2
114,581 - -1.0
114,626 - 0.4
114,677 + -1.0
114,711 - 1.1
114,857 - 10486 mRNA_2118 0.12 -1.0
114,893 + 10486 mRNA_2118 0.13 -0.4
115,108 + 10486 mRNA_2118 0.22 -0.6
115,414 + 10486 mRNA_2118 0.34 -0.1
115,415 + 10486 mRNA_2118 0.34 0.1
115,489 - 10486 mRNA_2118 0.37 0.3
115,498 - 10486 mRNA_2118 0.38 -0.1
115,546 + 10486 mRNA_2118 0.40 1.2
115,565 - 10486 mRNA_2118 0.40 1.5
115,609 + 10486 mRNA_2118 0.42 1.2
116,196 + 10486 mRNA_2118 0.66 0.8
116,299 - 10486 mRNA_2118 0.70 0.3
116,384 - 10486 mRNA_2118 0.74 1.5
116,516 + 10486 mRNA_2118 0.79 0.3
116,567 - 10486 mRNA_2118 0.81 1.9
116,790 + 0.7
116,790 + -0.2
117,160 - 2.2
117,179 + 0.3
117,179 + -1.5
117,193 + 0.0
117,193 + -1.1
117,196 + -0.8
117,239 - 0.9
117,314 - 1.3
117,319 + -0.2
117,319 + -1.2
117,338 + -0.8
117,339 - -0.8
117,341 + -0.0
117,397 + 1.4
117,458 - -0.1
117,538 - -0.4
117,541 - -0.6
117,542 - -1.0
117,565 + 1.1
117,587 - -0.1
117,588 - 0.6
117,824 - 10487 mRNA_2119 0.16 0.8
117,833 + 10487 mRNA_2119 0.16 -0.2
117,863 + 10487 mRNA_2119 0.18 -0.7
117,866 - 10487 mRNA_2119 0.18 1.1
117,929 + 10487 mRNA_2119 0.23 0.8