Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2040

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808552 to 810897 10407 mRNA_2040: 10408 - K11729 ACAD10 acyl-CoA dehydrogenase family member 10, at 811231 to 813728 10408

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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810,455 - 10407 mRNA_2039 0.81 0.7
810,465 + 10407 mRNA_2039 0.82 -0.2
810,509 - 10407 mRNA_2039 0.83 -1.0
810,735 - -0.1
810,817 + 0.3
811,068 + 0.2
811,081 + 0.4
811,081 + 1.7
811,084 - -1.4
811,116 - 0.5
811,117 - 0.1
811,138 - 1.3
811,140 + -1.9
811,140 - 0.8
811,225 - 0.5
811,247 + 0.3
811,269 + 0.6
811,547 - 10408 mRNA_2040 0.13 0.3
811,549 + 10408 mRNA_2040 0.13 0.3
811,553 + 10408 mRNA_2040 0.13 0.8
811,842 - 10408 mRNA_2040 0.24 0.1
811,845 + 10408 mRNA_2040 0.25 -0.0
812,145 + 10408 mRNA_2040 0.37 0.0
812,396 + 10408 mRNA_2040 0.47 -0.0
812,436 - 10408 mRNA_2040 0.48 0.0
812,481 - 10408 mRNA_2040 0.50 -0.4
812,493 + 10408 mRNA_2040 0.51 -0.4
812,591 - 10408 mRNA_2040 0.54 1.6
812,771 + 10408 mRNA_2040 0.62 0.3
813,191 - 10408 mRNA_2040 0.78 1.4
813,328 - 10408 mRNA_2040 0.84 0.9
813,332 - 10408 mRNA_2040 0.84 -0.3
813,491 + 3.5
813,507 + 0.1
813,642 - 1.5
813,792 - 2.2
813,803 + 0.9
813,819 + 0.1
813,823 - -0.3
813,824 - 0.1
813,827 + 0.8
813,829 - -0.2
813,829 - -0.4
813,833 + -0.3
813,835 - 0.1
814,314 + -0.3